Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40009
         (876 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    25   1.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.4  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   3.1  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   5.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.6  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 371 LTPVLLKVNSLVQL*LEMLVMFQGLGC 291
           L PVLL+V+ L  + +  L+M  G GC
Sbjct: 728 LCPVLLRVSILRNIIVGTLMMVLGTGC 754


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +3

Query: 6   VDRNGNTGMSSNNLDGN 56
           VD   N G S NN DGN
Sbjct: 454 VDHKNNLGDSKNNQDGN 470


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +3

Query: 6   VDRNGNTGMSSNNLDGN 56
           VD   N G S NN DGN
Sbjct: 346 VDHKNNLGDSKNNQDGN 362


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 198  KCFFDSPLNVVANCKDDSVYLFL 130
            +CFF S + +  N   + VYLFL
Sbjct: 1114 RCFFPSKIRICWNVLLNCVYLFL 1136


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 777 K*TPGYLTTPHPAPNSCTSSS 715
           K  PG+LT PH   N+ T  S
Sbjct: 2   KEVPGWLTPPHSLGNTVTPVS 22


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 376 NEFFNITTRSQTRSTRDKTNYSDQN*ATQFKS 471
           +E+F +TT    R        SD N AT+  S
Sbjct: 40  DEYFRLTTEGDCRDVVRCDKNSDNNGATRLAS 71


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/34 (20%), Positives = 13/34 (38%)
 Frame = -1

Query: 591 FCTSAGLWRCIPSYCFIVSITTHPRGVTLSVFTV 490
           FC  + +  C   YC    +   P G  + +  +
Sbjct: 489 FCNESSVSNCENEYCECTHVVNIPLGTVVEMVLI 522


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,920
Number of Sequences: 336
Number of extensions: 4734
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)