SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30013X
         (352 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   0.91 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   1.6  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    22   1.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   3.7  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   4.8  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   4.8  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   4.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   4.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   4.8  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   4.8  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    20   6.4  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    20   6.4  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           20   6.4  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    20   8.5  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    20   8.5  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    20   8.5  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    20   8.5  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    20   8.5  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    20   8.5  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    20   8.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   8.5  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    20   8.5  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    20   8.5  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    20   8.5  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    20   8.5  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    20   8.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 0.91
 Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
 Frame = +3

Query: 96  HNKYKLCL--FSISNNIVNYFLLLDCFFVYLQIKNGTILCTGFFVATLWF 239
           H  + LC+  F  +  I    LL  C F++  +    +LC  +F   L F
Sbjct: 159 HLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDYFTLHLLF 208



 Score = 22.6 bits (46), Expect = 1.2
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -1

Query: 145 FTILFDIEKRQSLYLLCFMYFKC 77
           F   F I     L+LLC  YF C
Sbjct: 268 FCCAFIIFTMHLLFLLCIYYFYC 290



 Score = 19.8 bits (39), Expect = 8.5
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -1

Query: 106 YLLCFMYFKC 77
           +LLC  YF C
Sbjct: 142 FLLCIYYFYC 151


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 176 LFTNKKRHDSMYRVLCRD 229
           L ++ K H ++YR  CRD
Sbjct: 274 LNSHMKSHSNVYRYSCRD 291


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 176 LFTNKKRHDSMYRVLCRD 229
           L ++ K H ++YR  CRD
Sbjct: 32  LNSHMKSHSNVYRYSCRD 49


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +3

Query: 219 FVATLWFPASTRHCA*CEFLT 281
           ++AT+W       C   EF+T
Sbjct: 731 YIATVWICTLMNRCKFSEFMT 751


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = -2

Query: 306 RLTFPLPKPLKTRTRHSASWKPGTTMSRQRTLY 208
           R  +P  + +      + ++ PG    RQRT Y
Sbjct: 208 RQIYPWMRKVHVAGASNGTFAPGMEPKRQRTAY 240


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = -2

Query: 306 RLTFPLPKPLKTRTRHSASWKPGTTMSRQRTLY 208
           R  +P  + +      + ++ PG    RQRT Y
Sbjct: 208 RQIYPWMRKVHVAGASNGTFAPGMEPKRQRTAY 240


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 273 FLTVSVAEKLTFFIIITPVG 332
           F+ +     LTF+II+ P G
Sbjct: 302 FICLLPFRALTFWIIVAPAG 321


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 183 VNRQKNNRGEESNLQYYSI*RRDR 112
           + R+ +  G E   +YY + RR+R
Sbjct: 513 LGRRWHALGREEQAKYYELARRER 536


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 183 VNRQKNNRGEESNLQYYSI*RRDR 112
           + R+ +  G E   +YY + RR+R
Sbjct: 405 LGRRWHALGREEQAKYYELARRER 428


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = -2

Query: 306 RLTFPLPKPLKTRTRHSASWKPGTTMSRQRTLY 208
           R  +P  + +      + ++ PG    RQRT Y
Sbjct: 208 RQIYPWMRKVHVAGASNGTFAPGMEPKRQRTAY 240


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 105 YKLCLFSISNNIVNYF 152
           Y+ C FSI+   +N+F
Sbjct: 55  YESCRFSINQPYLNHF 70


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 105 YKLCLFSISNNIVNYF 152
           Y+ C FSI+   +N+F
Sbjct: 55  YESCRFSINQPYLNHF 70


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 105 YKLCLFSISNNIVNYF 152
           Y+ C FSI+   +N+F
Sbjct: 55  YESCRFSINQPYLNHF 70


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 137 YCKLLSSPRLFFCLFTNKKRHD 202
           +C+ L S   F  LF  KKR +
Sbjct: 314 FCRTLGSLPPFKWLFKKKKRRN 335


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = +3

Query: 234 WFPASTRHC 260
           WFP   +HC
Sbjct: 134 WFPFDDQHC 142


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = +3

Query: 234 WFPASTRHC 260
           WFP   +HC
Sbjct: 134 WFPFDDQHC 142


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = +3

Query: 234 WFPASTRHC 260
           WFP   +HC
Sbjct: 134 WFPFDDQHC 142


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = +3

Query: 234 WFPASTRHC 260
           WFP   +HC
Sbjct: 134 WFPFDDQHC 142


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = +3

Query: 234 WFPASTRHC 260
           WFP   +HC
Sbjct: 134 WFPFDDQHC 142


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 147 NLQYYSI*RRDRVYICYVSCILN 79
           N+    I + DR+   YV+C+L+
Sbjct: 28  NIDLNQILKSDRLLKNYVNCLLD 50


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -2

Query: 303  LTFPLPKPLKTRTRHSASWKPGTT 232
            +T   P    T    + SW PG+T
Sbjct: 1340 VTTAKPAQSTTSVSTTTSWNPGST 1363


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +2

Query: 272 VFNGFGSGKVNLFYYY 319
           V+N + SG ++++Y Y
Sbjct: 265 VYNQWWSGPLSMYYQY 280


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 114 CLFSISNNIVNYFLLLD 164
           C++SIS + +N  LL +
Sbjct: 104 CIYSISRDYLNNVLLTE 120


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 114 CLFSISNNIVNYFLLLD 164
           C++SIS + +N  LL +
Sbjct: 104 CIYSISRDYLNNVLLTE 120


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 114 CLFSISNNIVNYFLLLD 164
           C++SIS + +N  LL +
Sbjct: 104 CIYSISRDYLNNVLLTE 120


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 147 NLQYYSI*RRDRVYICYVSCILN 79
           N+    I + DR+   YV+C+L+
Sbjct: 28  NIDLNQILKSDRLLKNYVNCLLD 50


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,986
Number of Sequences: 336
Number of extensions: 1736
Number of successful extensions: 28
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6981810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)

- SilkBase 1999-2023 -