Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10410
         (821 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    26   0.42 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   0.96 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.96 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.9  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   8.9  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    21   8.9  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 25.8 bits (54), Expect = 0.42
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = -3

Query: 687 FFRRYIVLLDFLENYISYTHRFQICNDNMHYRTCARAKFNNFI 559
           F R+++ L  + E+ +    RF+I  + +    C R K +N I
Sbjct: 375 FIRKHVELAHYFESLVRGDERFEITEEVVLGLVCFRLKASNEI 417


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 13/52 (25%), Positives = 24/52 (46%)
 Frame = +1

Query: 481 LLLI*LAFGIQICFPVKIPLTVVGELNEIVKFCTCTGSIVHIVVANLKPMCI 636
           +LLI    G+ +   +  PL V+   N  ++   C G  + + + +L  M I
Sbjct: 637 ILLITFQSGLNVVSCINFPLGVLDRGNFDIEIALCNGIFLLLTLGSLLQMVI 688


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -3

Query: 738 CRFAFYCRSKYPICKFFFFRRYIV 667
           C + FYC     +C ++F R +I+
Sbjct: 284 CIYYFYCALIILLCIYYFCRAFII 307


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +1

Query: 325 GSCQTIRLASHCQS*VTFHL 384
           G CQ ++   +C   + FHL
Sbjct: 31  GKCQRLKTDKNCTIVIIFHL 50


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/42 (21%), Positives = 18/42 (42%)
 Frame = -2

Query: 370 LMTDSVTPALLFDRSHRQISFKKKSRHASLFLCLWLIVDLRI 245
           L+   +TP   F      + F + +    LFL  W  +++ +
Sbjct: 89  LLNQLITPLFFFHSFMTSVLFSQVASRWPLFLNEWTKIEINL 130


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 695 LHIGYFDLQ*NANRHLGFFKIDANK 769
           LHI  FDL  NA  +    K D ++
Sbjct: 86  LHIHIFDLHRNAEIYPDLLKFDPDR 110


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,081
Number of Sequences: 336
Number of extensions: 3511
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22517873
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)