Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10401
         (768 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    23   2.0  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   2.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.0  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   2.7  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    23   3.6  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   3.6  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       22   4.7  
AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    21   8.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.2  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   8.2  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +3

Query: 225 CSKGVQYLNELRTLLWLDSSGPLRKE 302
           CS G+ Y  E R  +W D     + E
Sbjct: 124 CSPGLAYDREARVCMWADQVPECKNE 149


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +3

Query: 225 CSKGVQYLNELRTLLWLDSSGPLRKE 302
           CS G+ Y  E R  +W D     + E
Sbjct: 124 CSPGLAYDREARVCMWADQVPECKNE 149


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
 Frame = +1

Query: 505 YHGVLNRRRGHVFEESQVA--GTPMFIVKAYLP-VNESFGFTADLRSNTGGQGLPA 663
           YHG   R+ GH F    +   G P   +   +P   +SF  T   + N   QG+P+
Sbjct: 836 YHGAWERQTGHNFTMEYLVSRGAPRGKLLVGVPFYGQSFTLT---KGNNHDQGVPS 888


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 608 RSVLLPICVPTPADKAFPQCV 670
           RSV  P  +PTP+  A P  V
Sbjct: 216 RSVATPTGIPTPSTSASPPTV 236



 Score = 22.2 bits (45), Expect = 4.7
 Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
 Frame = -2

Query: 386 HHLYGWHQYGVLHHRC*IEHHANSLQP*LL-P*RPTGIQPQQSP*FIEVLNSFGAIDQDV 210
           ++ + W   G  H+     ++A +  P      +P  +  Q +   ++ +N+     Q  
Sbjct: 281 YNSFNWTANGHGHNTSSHNYYAQNYAPTYYGQMQPDYLNSQTTQNHMQAMNNMAGTYQMT 340

Query: 209 GAGTLGAKAPNLTGFG 162
           G   +G  AP+   FG
Sbjct: 341 GYSAMGMAAPHHQNFG 356


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 692 GGPANGRIRTAGRPCP 645
           GGP N  +R+ G P P
Sbjct: 82  GGPVNDDVRSPGTPGP 97


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 692 GGPANGRIRTAGRPCP 645
           GGP N  +R+ G P P
Sbjct: 238 GGPVNDDVRSPGTPGP 253


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -1

Query: 705 HGSPGRTCQWSNTHCGKALSAGVGT 631
           +G  G+TC   ++HC        GT
Sbjct: 134 NGWKGKTCSLKDSHCDHTTCKNGGT 158


>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -2

Query: 752 SFSFPVQRCRACSEVRTGLQGGPANGR 672
           S  +P++R R   + R  +Q G  +GR
Sbjct: 59  SSKYPIKRKRVRFQTRVKVQEGSKSGR 85


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +1

Query: 568 PMFIVKAYLPVNESFGFT 621
           P F      P+N SF FT
Sbjct: 629 PTFTALGLFPINGSFAFT 646


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = +3

Query: 447 VSWSLYI---FVKFSVLK*LWVVSRC 515
           V++ LY    F+K SVL+ LW    C
Sbjct: 544 VTYQLYCWSSFLKISVLQSLWASPTC 569


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -1

Query: 585 LHNEHRCTCHLGLF 544
           +H  H+CTC  G +
Sbjct: 356 IHAGHKCTCPEGFY 369


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/28 (39%), Positives = 11/28 (39%)
 Frame = -2

Query: 728 CRACSEVRTGLQGGPANGRIRTAGRPCP 645
           C   S   T   GGP  GR    G P P
Sbjct: 57  CARASSATT--MGGPRYGRAAAQGMPYP 82


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,699
Number of Sequences: 336
Number of extensions: 5069
Number of successful extensions: 19
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)