Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30088
         (622 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    27   0.17 
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    26   0.22 
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    26   0.22 
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    26   0.29 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   0.89 
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    23   2.1  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   8.3  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   8.3  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +3

Query: 447 VPPPPPTSTQKSFITTNVHPDTSKHKFRHQQG 542
           +PPPPP     S I  N +P   +H F    G
Sbjct: 213 IPPPPPEEDDDSNIPQN-NPKNKQHNFNLPPG 243


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 26.2 bits (55), Expect = 0.22
 Identities = 11/30 (36%), Positives = 21/30 (70%)
 Frame = -1

Query: 301 LFSGNVFLVFFEVLFCSKVVLRSVYALINL 212
           L +  VFL+F+ + +C K + + +Y+LI+L
Sbjct: 8   LTAAAVFLLFY-LFYCYKTIKQHIYSLISL 36


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 26.2 bits (55), Expect = 0.22
 Identities = 11/30 (36%), Positives = 21/30 (70%)
 Frame = -1

Query: 301 LFSGNVFLVFFEVLFCSKVVLRSVYALINL 212
           L +  VFL+F+ + +C K + + +Y+LI+L
Sbjct: 8   LTAAAVFLLFY-LFYCYKTIKQHIYSLISL 36


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = +3

Query: 126 KDEGQDEHNIRKQEEVLQEYLMMVPDCQRRLIKAYTDLKTTLEQNRTSK 272
           K +G+D+  + ++E VL   +   PD ++ L +A   L+     N  S+
Sbjct: 77  KIDGEDDSGLTEEEVVLSNAIAEGPDAEKALQRAALILRLREGMNSLSR 125


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 444 NVPPPPPTSTQKSFITT 494
           N PPPPP    +SF  T
Sbjct: 729 NAPPPPPPPRVESFAET 745


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = +2

Query: 494 KCAPRYKQAQVSPPARTYHRRATEDQDSSSKFIMATSV 607
           K AP+  QA + P  +    + T D D   K+  + ++
Sbjct: 548 KIAPQLDQAVIQPQVKPVLDKLTADSDIDVKYSASEAI 585


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 441 LNVPPPPPTST 473
           L+ PPPPP  T
Sbjct: 160 LHYPPPPPVYT 170


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 508 IQASTSFATSKDLPSTGHGGSR 573
           I AS + A +   PSTG G S+
Sbjct: 112 IPASVAAAFAPQGPSTGRGASK 133


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,638
Number of Sequences: 336
Number of extensions: 2973
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)