Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30087
(823 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 24 1.7
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 2.2
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 3.9
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 3.9
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 3.9
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 3.9
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 3.9
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 23 3.9
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 3.9
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 22 6.8
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 22 6.8
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 22 6.8
AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein. 22 6.8
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 6.8
AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 21 8.9
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -1
Query: 121 KSPGASTRATCGDRLTVSVHTHRQVCPTSMLW 26
K PG S GD + + V H T++ W
Sbjct: 104 KMPGPSVEVCLGDEVIIDVVNHLSSDSTTIHW 135
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.4 bits (48), Expect = 2.2
Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 1/101 (0%)
Frame = +1
Query: 316 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMD 495
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123
Query: 496 FIKFGLGTCV*SREAVTWGVWAPSCPARDIPA-PSTLCTSR 615
L T S + G+ +P + P P+T TS+
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQ 164
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/55 (21%), Positives = 22/55 (40%)
Frame = +1
Query: 316 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 480
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/55 (21%), Positives = 22/55 (40%)
Frame = +1
Query: 316 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 480
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/55 (21%), Positives = 22/55 (40%)
Frame = +1
Query: 316 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 480
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/55 (21%), Positives = 22/55 (40%)
Frame = +1
Query: 316 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 480
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/55 (21%), Positives = 22/55 (40%)
Frame = +1
Query: 316 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 480
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 20 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 74
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/55 (21%), Positives = 22/55 (40%)
Frame = +1
Query: 316 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 480
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/55 (21%), Positives = 22/55 (40%)
Frame = +1
Query: 316 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 480
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 21.8 bits (44), Expect = 6.8
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = -1
Query: 115 PGASTRATCGDRLTVSVHTHRQVCPTSMLW 26
PG S + GD++ + V H + ++ W
Sbjct: 172 PGPSIQVCEGDKVVIDVENHIEGNEVTLHW 201
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 21.8 bits (44), Expect = 6.8
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = -1
Query: 115 PGASTRATCGDRLTVSVHTHRQVCPTSMLW 26
PG S + GD++ + V H + ++ W
Sbjct: 172 PGPSIQVCEGDKVVIDVENHIEGNEVTLHW 201
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.8 bits (44), Expect = 6.8
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = -3
Query: 641 SWRSVSRGVLDVHNVEGAGMSLAGHDGAHTPQVTASRDHTQVPRP 507
S+ + + G + V G++ GH GA P + D P P
Sbjct: 95 SYANGAAGPIPVSMASKMGLAPTGHPGAALPFFCHNGDPLSQPPP 139
>AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein.
Length = 301
Score = 21.8 bits (44), Expect = 6.8
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = -1
Query: 700 RQRRCTPFVPLPIYEHV--VQPRGEVCPVESLMCTMSKEPG 584
R+ RC P PLP+ + + PR S + +SK G
Sbjct: 181 REERCDPDRPLPLDQKARDLSPRNGSPTDHSPVLNLSKSGG 221
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 6.8
Identities = 12/55 (21%), Positives = 21/55 (38%)
Frame = +1
Query: 316 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 480
H + P Y + +R+A P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLAPTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118
>AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine
kinase Torso-likeprotein protein.
Length = 803
Score = 21.4 bits (43), Expect = 8.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +2
Query: 488 LWTSSSLVWELVYDHGRP*LG 550
+W+ L+WE+V G P +G
Sbjct: 677 VWSFGVLLWEIVTLGGTPYVG 697
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,933
Number of Sequences: 336
Number of extensions: 4962
Number of successful extensions: 22
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22517873
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -