Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30085
         (848 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   3.1  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   3.1  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   5.3  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   5.3  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   5.3  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   5.3  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   7.0  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   7.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   7.0  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   9.3  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +3

Query: 156 EFVLQAGQLMRLALLKFLV 212
           +F+L+ GQL+ LA +KF V
Sbjct: 82  KFLLKLGQLLGLAPVKFYV 100


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +3

Query: 156 EFVLQAGQLMRLALLKFLV 212
           +F+L+ GQL+ LA +KF V
Sbjct: 8   KFLLKLGQLLGLAPVKFYV 26


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -1

Query: 137 LFRTCAFLLFVKLHHHTDR*V*VKIHHNFRLHLA 36
           ++ +C F +     +H D  V   ++H+F  HL+
Sbjct: 54  IYESCRFSINQPYLNHFDNSVTPMVNHDFTQHLS 87


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -1

Query: 137 LFRTCAFLLFVKLHHHTDR*V*VKIHHNFRLHLA 36
           ++ +C F +     +H D  V   ++H+F  HL+
Sbjct: 54  IYESCRFSINQPYLNHFDNSVTPMVNHDFTQHLS 87


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +1

Query: 289 ELDLNSVVNIISPCKNNDYEPVTPKSESQLESDNEDRRTHLS 414
           EL  +S  + I P    DY  V        +S+  DRR  +S
Sbjct: 147 ELRSSSAFSYIKPSSERDYFSVKKLPSPASDSECFDRRKFIS 188


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -1

Query: 137 LFRTCAFLLFVKLHHHTDR*V*VKIHHNFRLHLA 36
           ++ +C F +     +H D  V   ++H+F  HL+
Sbjct: 54  IYESCRFSINQPYLNHFDNSVTPMVNHDFTQHLS 87


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 167 PSWPADAISTPEVLSYVEQLEKEKCSRAF 253
           P W A    TPE+++Y+E+  K + +  F
Sbjct: 384 PCWNA----TPEIITYLEKNGKPRTTDTF 408


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 427 DASFCLNVFFCLHYQ 383
           +AS    VFFCL YQ
Sbjct: 87  NASGVATVFFCLFYQ 101


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 366 TFWSDWFIIIIFARTNDVY 310
           TFWS +FI+ +    N  Y
Sbjct: 273 TFWSAFFIVNVLYICNQCY 291


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +3

Query: 678 DKNNGSFPKDPEWTRETPRNYQVGTIGQ*FGKERRFNKL 794
           D N+   P+D      +P     GT G  +G E R+ ++
Sbjct: 348 DNNDQGPPQDDAGNLISPSINDDGTCGNGYGCEHRWRQI 386


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,461
Number of Sequences: 336
Number of extensions: 4437
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)