Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30082
(859 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 25 1.0
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 23 4.1
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 5.4
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 5.4
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 5.4
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 5.4
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 22 7.1
U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 22 7.1
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 22 7.1
AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory recept... 22 7.1
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 9.4
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 9.4
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 21 9.4
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 9.4
>AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle
nuclear receptor protein.
Length = 407
Score = 24.6 bits (51), Expect = 1.0
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -2
Query: 834 FPVGAHGQVLGPKRQTPGTS 775
F +G HG +L P TP S
Sbjct: 49 FSMGGHGSLLSPSGNTPNKS 68
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/45 (22%), Positives = 20/45 (44%)
Frame = +1
Query: 709 ANTLKGTGPNFHAFLKKGGSHFACTRGLPFWA*NLTVGPNRKNCL 843
A+ T H +++KG G+P + + ++ N +N L
Sbjct: 2038 ADATFNTNFTIHYWIEKGADRRKLVMGMPMYGQSFSLADNNQNGL 2082
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 5.4
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = +1
Query: 460 WSWSLWSASRCW 495
W W LW S+ W
Sbjct: 465 WIWLLWLLSQTW 476
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 5.4
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = +1
Query: 460 WSWSLWSASRCW 495
W W LW S+ W
Sbjct: 465 WIWLLWLLSQTW 476
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 22.2 bits (45), Expect = 5.4
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = +1
Query: 460 WSWSLWSASRCW 495
W W LW S+ W
Sbjct: 465 WIWLLWLLSQTW 476
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 22.2 bits (45), Expect = 5.4
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = +1
Query: 460 WSWSLWSASRCW 495
W W LW S+ W
Sbjct: 465 WIWLLWLLSQTW 476
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 21.8 bits (44), Expect = 7.1
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +1
Query: 559 GGKPVRSRLSEGFGGLLRYKVGLS 630
GG+ + GFG ++ ++ GLS
Sbjct: 245 GGEAISKHEYTGFGTVIEFQYGLS 268
>U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II
protein.
Length = 490
Score = 21.8 bits (44), Expect = 7.1
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +1
Query: 559 GGKPVRSRLSEGFGGLLRYKVGLS 630
GG+ + GFG ++ ++ GLS
Sbjct: 246 GGEAISKHEYTGFGTVIEFQYGLS 269
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 21.8 bits (44), Expect = 7.1
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +1
Query: 559 GGKPVRSRLSEGFGGLLRYKVGLS 630
GG+ + GFG ++ ++ GLS
Sbjct: 246 GGEAISKHEYTGFGTVIEFQYGLS 269
>AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory receptor
candidate 20 protein.
Length = 393
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 425 LLLFRRQVENCFLVGGMRLQYVSL 354
LL+F +Q+ CF V +RL+ L
Sbjct: 181 LLIFVQQIPFCFFVRVIRLKIEDL 204
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.4 bits (43), Expect = 9.4
Identities = 5/12 (41%), Positives = 7/12 (58%)
Frame = +1
Query: 460 WSWSLWSASRCW 495
W W +W S+ W
Sbjct: 219 WIWLVWLLSQAW 230
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.4 bits (43), Expect = 9.4
Identities = 5/12 (41%), Positives = 7/12 (58%)
Frame = +1
Query: 460 WSWSLWSASRCW 495
W W +W S+ W
Sbjct: 452 WIWLVWLLSQAW 463
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 21.4 bits (43), Expect = 9.4
Identities = 7/23 (30%), Positives = 12/23 (52%)
Frame = +1
Query: 490 CWSGWPKLQVVWCHLRDHHGQEP 558
C + + + HLR H G++P
Sbjct: 255 CGKSYARPSTLKTHLRTHSGEKP 277
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.4 bits (43), Expect = 9.4
Identities = 5/12 (41%), Positives = 7/12 (58%)
Frame = +1
Query: 460 WSWSLWSASRCW 495
W W +W S+ W
Sbjct: 452 WIWLVWLLSQAW 463
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,371
Number of Sequences: 336
Number of extensions: 4795
Number of successful extensions: 22
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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