Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00021
         (562 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    25   0.44 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.4  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   4.1  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    21   7.2  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   7.2  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    21   7.2  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   7.2  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    21   7.2  
AF260823-1|AAG02021.1|  138|Tribolium castaneum alpha-esterase l...    21   7.2  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 13/39 (33%), Positives = 15/39 (38%)
 Frame = -2

Query: 435 VGIWKSTKYFPPTRMCCTFGISSQSKQHIVSPVRNLVSL 319
           +  W  T   PP          SQS   I  PV NL +L
Sbjct: 321 INCWSLTSSPPPPYQISAQPTPSQSPNQIYQPVTNLTNL 359


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +1

Query: 331 VPNGRHYVLFRLRADAEG 384
           VPN   YV+FR RAD  G
Sbjct: 649 VPNNG-YVIFRFRADNPG 665


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
          protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 35 SGHAEAAPRFPHQLRSDTP 91
          SG A   P  PH+  + TP
Sbjct: 2  SGEAHIGPPTPHESNTSTP 20


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 170 PWHGLHDVTFDLFVLKYRQPII 105
           PW G+ D T D      R P++
Sbjct: 52  PWSGIRDATQDGTPCISRHPVL 73


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 170 PWHGLHDVTFDLFVLKYRQPII 105
           PW G+ D T D      R P++
Sbjct: 52  PWSGIRDATQDGTPCISRHPVL 73


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 170 PWHGLHDVTFDLFVLKYRQPII 105
           PW G+ D T D      R P++
Sbjct: 52  PWSGIRDATQDGTPCISRHPVL 73


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 170 PWHGLHDVTFDLFVLKYRQPII 105
           PW G+ D T D      R P++
Sbjct: 52  PWSGIRDATQDGTPCISRHPVL 73


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 170 PWHGLHDVTFDLFVLKYRQPII 105
           PW G+ D T D      R P++
Sbjct: 51  PWSGIRDATQDGTPCISRHPVL 72


>AF260823-1|AAG02021.1|  138|Tribolium castaneum alpha-esterase like
           protein E4 protein.
          Length = 138

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 170 PWHGLHDVTFDLFVLKYRQPII 105
           PW G+ D T D      R P++
Sbjct: 24  PWSGIRDATQDGTPCISRHPVL 45


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,947
Number of Sequences: 336
Number of extensions: 2295
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)