Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0208.Seq
         (796 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    44   1e-06
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    29   0.057
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   2.1  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   8.6  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 44.0 bits (99), Expect = 1e-06
 Identities = 23/71 (32%), Positives = 34/71 (47%)
 Frame = +3

Query: 294 FSVFYDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHG 473
           FS+F  K R  A  L  +F  A+  +     A F R  +N   F YAF +A++ R D   
Sbjct: 80  FSLFIPKHRKVAGKLIRIFLAAESIDDLLSNAVFCRDRVNPYLFYYAFSVALLHRPDTQN 139

Query: 474 FVVPAPYEVYP 506
             +P+   V+P
Sbjct: 140 LDLPSFIHVFP 150


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 28.7 bits (61), Expect = 0.057
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +3

Query: 300  VFYDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVI 452
            V Y K + + + +    YYA  F     T+ F  +H   GQFL  ++I +I
Sbjct: 1201 VNYKKKKFQRMVVARYVYYATIFTIITATSSFVTIHNVIGQFL-GYFIGLI 1250


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +1

Query: 124 KILSFFQDVSQLNTDDEYYKIGKDYDIEMNMDNYTNKK 237
           K +S    +S L+ D EYY   + YD E   D   NKK
Sbjct: 385 KGVSIMVPISGLHYDPEYYPDPEKYDPERFSDE--NKK 420


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 579 SGLMRPSCIFVT*IFCSTSIFINI*GIL 496
           +G+ RPS  F++     + IFI I  IL
Sbjct: 482 NGMYRPSIYFISKTLAESPIFIIIPVIL 509


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,067
Number of Sequences: 336
Number of extensions: 3778
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21583952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)