Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0077
         (449 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    28   0.035
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.8  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    20   9.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 28.3 bits (60), Expect = 0.035
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -2

Query: 94  VFKLFCLCFYHFFVCFNLF 38
           V  LF LC YHFF  F +F
Sbjct: 158 VHLLFLLCIYHFFCAFIIF 176



 Score = 22.6 bits (46), Expect = 1.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 82  FCLCFYHFFVCFNLF 38
           F LC Y+F+  F +F
Sbjct: 142 FLLCIYYFYCAFIIF 156



 Score = 22.2 bits (45), Expect = 2.3
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -2

Query: 85  LFCLCFYHFFVCFNLFKFCTKNFMSFF 5
           LF LC Y+F+ C  +   C   F   F
Sbjct: 280 LFLLCIYYFY-CALIILLCIYYFCRAF 305



 Score = 21.8 bits (44), Expect = 3.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 85  LFCLCFYHFFVCFNLF 38
           +  LC Y+F+  F LF
Sbjct: 233 IILLCIYYFYYAFILF 248



 Score = 21.4 bits (43), Expect = 4.0
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = -2

Query: 94  VFKLFCLCFYHFFVCFNLFKFCTKNFMSFF 5
           V  LF LC Y+F V    F  C   F   F
Sbjct: 125 VHLLFLLCIYYFVVPL-FFLLCIYYFYCAF 153



 Score = 20.6 bits (41), Expect = 7.1
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -2

Query: 85  LFCLCFYHFFVCFNLF 38
           +  LC Y+F+  F +F
Sbjct: 108 IILLCVYYFYYAFIIF 123


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +1

Query: 181  RVCRWSAWFLAMEHLRKPGQSPGLHSWAHNSK 276
            ++C W       E  +KPG  P   SW   +K
Sbjct: 1142 KICDWPKSAKCEE--KKPGHKPSTSSWQKPTK 1171


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 49  FNLFKFCTKNFMSFF 5
           ++L   C +NF+ FF
Sbjct: 104 YSLISECAENFVDFF 118


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,916
Number of Sequences: 336
Number of extensions: 1795
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)