Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0070
         (594 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   1.9  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   3.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.5  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   5.9  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   5.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   5.9  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = +2

Query: 38  IFIMLVACVASQRTVLWYVVQTTVKKIHAYSHHLFAL 148
           + I+   CV ++++V  ++ + TV+    Y H  + L
Sbjct: 129 VVIIYSICVQTEKSVFDFLCRHTVEYFQNYIHFFYQL 165


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +1

Query: 109 EKNPCIQPPLVCPKNTEHRXRHAGKXACC 195
           E+ PCI     C KNT    R A    CC
Sbjct: 86  EREPCIAGSAPCRKNT---GRCAFDGICC 111


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -3

Query: 211 ELHKRDNKXTFQRVWXDAQCS*GKQVVAVCMDFF 110
           +LHK DNK     +W   + +   Q+   C  FF
Sbjct: 110 KLHKLDNKLKHMLIWKSYKRT---QIFITCELFF 140


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +2

Query: 47  MLVACVASQRTVLWYVVQTTVKKIHAYSHHL 139
           M+V  V S   + WY    T      Y+H L
Sbjct: 187 MVVFHVESHPNITWYQQCVTYNVFPTYAHEL 217


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +2

Query: 47  MLVACVASQRTVLWYVVQTTVKKIHAYSHHL 139
           M+V  V S   + WY    T      Y+H L
Sbjct: 187 MVVFHVESHPNITWYQQCVTYNVFPTYAHEL 217


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 515 PCQDIGTCM*LV 550
           PCQ+ GTC+ L+
Sbjct: 192 PCQNGGTCLDLI 203


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,618
Number of Sequences: 336
Number of extensions: 3144
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)