Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0062
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    23   1.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.3  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   5.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   7.1  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   9.4  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   9.4  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   9.4  

>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 72  DDLAQRCAQYKKDGCH 119
           D++A RCA  +++ CH
Sbjct: 161 DEIAIRCAFLERENCH 176


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 426 TXSRAPPXTXSFXPCPPQFPE*HSSPVVV 512
           T +  PP   +F  C    PE +S+P +V
Sbjct: 689 THADLPPVPPNFPTCGDHVPEINSNPNLV 717


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +2

Query: 149 WPQHPLVP 172
           WPQH L+P
Sbjct: 582 WPQHMLIP 589


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 71  QTLGGAFVFRSEQRDDTLVD 12
           Q LGG     SEQ D+T +D
Sbjct: 546 QILGGEACLWSEQFDETSLD 565


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 9/34 (26%), Positives = 15/34 (44%)
 Frame = +2

Query: 164 LVPSYPGKRQCSRPLRLHLSEPTHRANCRAQVLP 265
           +VP   G  +   P+ L  SEP  +   +  + P
Sbjct: 158 VVPEVGGVEEAKGPVDLSKSEPEKKTESQPMLWP 191


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +2

Query: 149 WPQHPLVP 172
           WPQH L+P
Sbjct: 581 WPQHMLLP 588


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = +3

Query: 426 TXSRAPPXTXSFXPCPPQFPE*HSSPV 506
           T S  PP   S  P P Q P     PV
Sbjct: 327 TSSPPPPYQISAQPTPSQSPNQIYQPV 353


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,705
Number of Sequences: 336
Number of extensions: 2455
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)