Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0056
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    24   0.66 
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   4.7  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   4.7  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    21   8.1  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   8.1  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 24.2 bits (50), Expect = 0.66
 Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = +2

Query: 35  FVHLSKQKQTQDKMCDRKAVIKNADMSEEMQQD--AVDCATQALEKFNIEKDIA-AFIKK 205
           F+ + KQK  +D   D+KA+ K     E+ ++D  +V   T  +E    + D +    + 
Sbjct: 68  FIKMVKQKHKKDIRADKKALQKLRREVEKAKRDLSSVHKTTLTIENLLADYDFSETLTRA 127

Query: 206 EFDKKYN 226
           +F++  N
Sbjct: 128 KFEELNN 134


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +1

Query: 220 IQSYLALHRGSYFGSYVTHETRHFIY 297
           + S+L L RGS     V    + F Y
Sbjct: 342 VPSFLKLQRGSDISKLVAKNIKEFYY 367


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +1

Query: 220 IQSYLALHRGSYFGSYVTHETRHFIY 297
           + S+L L RGS     V    + F Y
Sbjct: 342 VPSFLKLQRGSDISKLVAKNIKEFYY 367


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 237 IASWVVFWL 263
           I SWV FWL
Sbjct: 83  IISWVSFWL 91


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -2

Query: 369 KKIEVMLNGLTALKEQYSHLSQVEVDEV 286
           KK++ +L+    L+  +  L+  E DEV
Sbjct: 177 KKVDDILSQAYKLEASFDDLATYETDEV 204


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,464
Number of Sequences: 336
Number of extensions: 2385
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)