Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0039
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    24   1.0  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    23   3.2  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    23   3.2  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    23   3.2  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   4.2  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   7.3  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   7.3  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   7.3  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   9.7  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = +2

Query: 35  FVHLSKQKQTQDKMCDRKAVIKNADMSEEMQQD--AVDCATQALEKFNIEKDIA-AFIKK 205
           F+ + KQK  +D   D+KA+ K     E+ ++D  +V   T  +E    + D +    + 
Sbjct: 68  FIKMVKQKHKKDIRADKKALQKLRREVEKAKRDLSSVHKTTLTIENLLADYDFSETLTRA 127

Query: 206 EFDKKYN 226
           +F++  N
Sbjct: 128 KFEELNN 134


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 601 SSLSPRAHAVYVCTVLAITLRD 666
           SS S    AV+VC VLA+  ++
Sbjct: 5   SSKSISTQAVWVCMVLAVVFQE 26


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 601 SSLSPRAHAVYVCTVLAITLRD 666
           SS S    AV+VC VLA+  ++
Sbjct: 5   SSKSISTQAVWVCMVLAVVFQE 26


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 601 SSLSPRAHAVYVCTVLAITLRD 666
           SS S    AV+VC VLA+  ++
Sbjct: 5   SSKSISTQAVWVCMVLAVVFQE 26


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -2

Query: 526 LSHSLETVHTSTSLASSCHTLAASYLWEC 440
           + HSL T     +L  +   L  ++ WEC
Sbjct: 1   MKHSLATYLLFLALLKNISALNGAWRWEC 29


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 560 NRKFTMLDINCVLPLHLV 613
           N KFT LD++  L  HL+
Sbjct: 37  NGKFTALDVDPTLCTHLL 54


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +1

Query: 220 IQSYLALHRGSYFGSYVTHETRHFIY 297
           + S+L L RGS     V    + F Y
Sbjct: 342 VPSFLKLQRGSDISKLVAKNIKEFYY 367


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +1

Query: 220 IQSYLALHRGSYFGSYVTHETRHFIY 297
           + S+L L RGS     V    + F Y
Sbjct: 342 VPSFLKLQRGSDISKLVAKNIKEFYY 367


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 554 LFNRKFTMLDINCVLPLHLV 613
           L N KFT+ DI+  L  HL+
Sbjct: 34  LNNGKFTVEDIDPTLCTHLI 53


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,029
Number of Sequences: 336
Number of extensions: 3498
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)