Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0035
         (682 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   4.0  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   7.1  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   9.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.3  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   9.3  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   9.3  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   9.3  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   9.3  

>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 670 W*NYAWSGSKFRGKP*WRTVSDSNV 596
           W N+A +GS    +P W+ +S   +
Sbjct: 458 WTNFARNGSPNVDEPDWKPISKEEI 482


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = -2

Query: 249 SLXTAGRWPWKSESAKECATTHHPKQPALKMDGAEAFC 136
           +L  A RW  KS   ++   T   +   L +     FC
Sbjct: 20  ALNGAWRWECKSNYCQKAPITPDTEATGLSLPACRLFC 57


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 582 DDRFGTLESLTVLHQGFPLN 641
           D     + ++T  HQG+P N
Sbjct: 376 DTNDNNVSAVTTQHQGYPTN 395


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 519  LRTEPATRWVRLVLSPLYPVSDDR 590
            L     T W  L+   L+P+ DD+
Sbjct: 1188 LNRNEETFWNELIEQYLHPIEDDK 1211


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 519  LRTEPATRWVRLVLSPLYPVSDDR 590
            L     T W  L+   L+P+ DD+
Sbjct: 1188 LNRNEETFWNELIEQYLHPIEDDK 1211


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -1

Query: 670 W*NYAWSGSKFRGKP*WRTVSDSNV 596
           W N+A +GS     P W+ +S   +
Sbjct: 456 WTNFARNGSPNVDGPDWKPISKEEI 480


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -1

Query: 670 W*NYAWSGSKFRGKP*WRTVSDSNV 596
           W N+A +GS     P W+ +S   +
Sbjct: 456 WTNFARNGSPNVDGPDWKPISKEEI 480


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -1

Query: 670 W*NYAWSGSKFRGKP*WRTVSDSNV 596
           W N+A +GS     P W+ +S   +
Sbjct: 458 WTNFARNGSPNVDGPDWKPISKEEI 482


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 5/22 (22%), Positives = 13/22 (59%)
 Frame = -1

Query: 334 VSRNGAXG*TKRSVKAPKKRSW 269
           ++ N     T + ++ PK+++W
Sbjct: 88  LNNNNVVSSTNQEIRGPKRKTW 109


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,276
Number of Sequences: 336
Number of extensions: 3690
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)