Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0022
         (671 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.75 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.75 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   1.7  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   2.3  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +1

Query: 403 MFSISFCFFPSRVLLVYKNRF 465
           +F++  C+  S ++L+ KNRF
Sbjct: 532 VFNVVHCYLASELVLMLKNRF 552



 Score = 21.8 bits (44), Expect = 5.3
 Identities = 6/21 (28%), Positives = 15/21 (71%)
 Frame = +1

Query: 403 MFSISFCFFPSRVLLVYKNRF 465
           +F+ + C+  + ++L+ KNR+
Sbjct: 812 IFNAAHCYLATELVLMLKNRY 832


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 24/73 (32%), Positives = 32/73 (43%)
 Frame = +1

Query: 232 FVFYLFFLFRALPFCFAFIL*VVAFRFYLELCNVFFFNKHVTLLTIN*HD*LSRWHLMFS 411
           FV  LFFL     F  AFI+  V   F   LC   FF   + + T+         HL+F 
Sbjct: 136 FVVPLFFLLCIYYFYCAFIIFTVHLLFL--LCIYHFFCAFI-IFTM---------HLLFC 183

Query: 412 ISFCFFPSRVLLV 450
            +F FF   +L +
Sbjct: 184 CAFIFFNMHLLFL 196



 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 235 VFYLFFLFRALPFCFAFIL*VVAFRFY 315
           +F + FL     F +AFI+ +  + FY
Sbjct: 91  IFTVHFLLCTYYFYYAFIILLCVYYFY 117


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
 Frame = +1

Query: 244 LFFLFRALPFCFAFIL*VVAFRFYLELCNVFFFNKHVTLLTIN*HD--*LSRWHLMFSIS 417
           + FLF  +P     IL  +  +  +        NKH+  +++       L    ++ S  
Sbjct: 241 IIFLFFIIPLIILLILYCIIAKNLMSNAATLVLNKHIDNISLRARKQVVLMLGTVVLSFF 300

Query: 418 FCFFPSRVLLVY 453
            C  P RV +++
Sbjct: 301 LCLIPFRVFILW 312


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 214 KRV*KEFVFYLFFLFRALPFCF 279
           KR    +V YL    + +PFCF
Sbjct: 171 KRFLPVYVSYLLIFVQQIPFCF 192


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,068
Number of Sequences: 336
Number of extensions: 2397
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)