Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0017
         (662 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   1.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.8  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   6.8  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   6.8  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   6.8  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
 Frame = +1

Query: 319 VKYF--LLRFFFES*IYLYTNLLLFR 390
           V+YF   + FF++  +YL T+++L R
Sbjct: 152 VEYFQNYIHFFYQLLLYLITDMILMR 177



 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = -1

Query: 527 NNYHYYSITIFFKCLRKAAVRYKLFVITIFF 435
           N  H   + +FFK        Y + V+T F+
Sbjct: 59  NEIHIKIVLMFFKEASLYCFNYYVIVVTTFY 89


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +3

Query: 27  MYVIKM*NLLSIYIVINSLFNFKYICC 107
           + V K  N L IY+  N +F F    C
Sbjct: 5   LVVEKFLNSLQIYLQHNQIFGFVTFTC 31


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 363 IYSTFKKKSKQ 331
           +YST+ KKSKQ
Sbjct: 149 LYSTWSKKSKQ 159


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 363 IYSTFKKKSKQ 331
           +YST+ KKSKQ
Sbjct: 149 LYSTWSKKSKQ 159


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +3

Query: 27  MYVIKM*NLLSIYIVINSLFNFKYICC 107
           + V K  N L IY+  N +F F    C
Sbjct: 23  LVVEKFLNSLQIYLQHNQIFGFVTFTC 49


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,806
Number of Sequences: 336
Number of extensions: 3339
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)