Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0062.Seq
         (742 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    24   1.1  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    24   1.5  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   3.4  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   7.9  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +2

Query: 557 CDLEITGSPKPV 592
           CDL++TG+P P+
Sbjct: 53  CDLDVTGTPPPL 64


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 178 CYYNSK*YIKD 146
           CYYNSK Y +D
Sbjct: 23  CYYNSKAYFRD 33


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 483 VARIIINNLIMTKNKYNSHIK 545
           V  I + NLI+ +N Y++ IK
Sbjct: 163 VTHIFLQNLILKENTYDAVIK 183


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 5/17 (29%), Positives = 9/17 (52%)
 Frame = -1

Query: 430 WFLFQIVSIYIKYGCFC 380
           W++   + + I  GC C
Sbjct: 40  WYICYTIGVIITIGCLC 56


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,853
Number of Sequences: 336
Number of extensions: 3335
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)