Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0045.Seq
(677 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U77974-1|AAB36556.1| 276|Tribolium castaneum transcription fact... 25 0.43
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 24 1.00
EF592536-1|ABQ95982.1| 598|Tribolium castaneum beta-N-acetylglu... 23 1.7
DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8 prot... 23 3.0
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 4.0
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 4.0
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 4.0
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 4.0
EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 22 5.3
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 5.3
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 21 7.0
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 21 7.0
>U77974-1|AAB36556.1| 276|Tribolium castaneum transcription factor
homolog protein.
Length = 276
Score = 25.4 bits (53), Expect = 0.43
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -2
Query: 643 WKLPIKSSSCLSPVRAAVSRPPAHD 569
+++P KSS SPV++ VS P H+
Sbjct: 221 FEVPTKSSPRSSPVQSDVSLSPVHE 245
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 24.2 bits (50), Expect = 1.00
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 469 NYALYPHMTVYDNMAFG 419
N+ YP M + D+M FG
Sbjct: 202 NHTFYPWMAIADSMTFG 218
>EF592536-1|ABQ95982.1| 598|Tribolium castaneum
beta-N-acetylglucosaminidase NAG1 protein.
Length = 598
Score = 23.4 bits (48), Expect = 1.7
Identities = 7/28 (25%), Positives = 17/28 (60%)
Frame = -2
Query: 373 NWAAQILGLREYLKRKPGALSGGQRQRV 290
NW + +G ++ + KP ++G ++ +V
Sbjct: 487 NWCSPYIGWQKVYENKPAKIAGDKKGQV 514
>DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8
protein.
Length = 496
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 581 WSTYRSPNGRQT 616
WSTYR NGR T
Sbjct: 33 WSTYRWGNGRFT 44
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.0
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 481 MVFQNYALYPH-MTVYDNMAFGLKMQKIAKEVIDERVNW 368
++F L P +TV+ N G + Q I K ERV W
Sbjct: 93 LLFMTSQLKPDKVTVFCNRDLGREKQFIVKLPSAERVAW 131
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.0
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 481 MVFQNYALYPH-MTVYDNMAFGLKMQKIAKEVIDERVNW 368
++F L P +TV+ N G + Q I K ERV W
Sbjct: 93 LLFMTSQLKPDKVTVFCNRDLGREKQFIVKLPSAERVAW 131
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.0
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 481 MVFQNYALYPH-MTVYDNMAFGLKMQKIAKEVIDERVNW 368
++F L P +TV+ N G + Q I K ERV W
Sbjct: 93 LLFMTSQLKPDKVTVFCNRDLGREKQFIVKLPSAERVAW 131
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.0
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 481 MVFQNYALYPH-MTVYDNMAFGLKMQKIAKEVIDERVNW 368
++F L P +TV+ N G + Q I K ERV W
Sbjct: 93 LLFMTSQLKPDKVTVFCNRDLGREKQFIVKLPSAERVAW 131
>EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4
protein.
Length = 475
Score = 21.8 bits (44), Expect = 5.3
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +2
Query: 581 WSTYRSPNGRQT 616
WSTYR NG+ T
Sbjct: 29 WSTYRLNNGKFT 40
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +3
Query: 564 RQSCAGGRLTAARTGDKHD-ELFIGNFQ 644
R S GR+T + G+K D LF+ + +
Sbjct: 627 RDSSGAGRITCEKCGNKIDTSLFVDHIR 654
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 524 PSINRSPPLISSSPAIM 574
P ++ PP +SS PAI+
Sbjct: 234 PGLSPHPPHLSSHPAIV 250
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 524 PSINRSPPLISSSPAIM 574
P ++ PP +SS PAI+
Sbjct: 126 PGLSPHPPHLSSHPAIV 142
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,457
Number of Sequences: 336
Number of extensions: 3737
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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