Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301C02f
         (506 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    25   0.51 
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   1.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   2.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   2.7  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   2.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.6  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   6.3  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   6.3  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   8.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.4  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 24.6 bits (51), Expect = 0.51
 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
 Frame = +3

Query: 144 RQPSNRIGVGSLYGLMVFCTS----KLEVCYIEANGFYLGKLRGL---LGDGN 281
           R+P NRI   +  G +V C++      ++ ++ ++G  +G + GL   L +GN
Sbjct: 27  REPPNRIDFSNTTGAVVECSAHGNPTPDIIWVRSDGTAVGDVPGLRQVLANGN 79


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 7   FKTENPRLLFWKIRAEL 57
           +K ENP +  W+IR  L
Sbjct: 124 YKRENPSIFSWEIRDRL 140


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 11/43 (25%), Positives = 19/43 (44%)
 Frame = +3

Query: 309 PNGKICTSESEFGNAYRLARSCPQVQAPEHSHHQLHDASLPPP 437
           P G +  S S    +  ++ + P +     + H+  D  LPPP
Sbjct: 696 PGGMVLPSPSTSVASPSVSVASPYMLQSPLTPHEAFDVKLPPP 738


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 11/43 (25%), Positives = 19/43 (44%)
 Frame = +3

Query: 309 PNGKICTSESEFGNAYRLARSCPQVQAPEHSHHQLHDASLPPP 437
           P G +  S S    +  ++ + P +     + H+  D  LPPP
Sbjct: 588 PGGMVLPSPSTSVASPSVSVASPYMLQSPLTPHEAFDVKLPPP 630


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
 Frame = +3

Query: 375 PQVQA-PEHSHHQLHDASLPPPANRSSG 455
           PQ  A P  S      A+ PPPA  SSG
Sbjct: 15  PQSAATPISSSGMTSPAAAPPPATTSSG 42


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 350 RVPSGPQLSTGASART 397
           R PSGP+LS  ++A T
Sbjct: 36  RYPSGPELSDRSAAYT 51


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +2

Query: 410 AARCIPPPACEQVFGGISPLRTLSXFMD-MSPF 505
           AA+ + P   E ++G +  L T   F+D   PF
Sbjct: 205 AAKHMWPADLEAIYGSLKNLNTDHGFLDGQKPF 237


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 446 VFGGISPLRTLSXFMDMSP 502
           +FG    L TLS  MD+ P
Sbjct: 175 IFGARHGLETLSQLMDVYP 193


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -1

Query: 164 DSVAWLTESEHILFDDRESFGSSVQNSLSIFFQF 63
           + V W+  +   ++D  ES GSS    LS   QF
Sbjct: 292 EDVRWVMIALRQMYDRGESKGSSCYRLLSRNGQF 325


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 149 TKQQNRCWLIVRS 187
           TKQQ++  LIVRS
Sbjct: 484 TKQQSKIHLIVRS 496


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,470
Number of Sequences: 336
Number of extensions: 2778
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)