Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301B11f
         (426 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          23   1.2  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       23   1.2  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           23   1.2  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    23   1.2  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   1.2  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   2.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   5.0  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   5.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    20   8.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   8.7  

>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +1

Query: 238 NPELKPPTKPEADWNLYICNLP 303
           N  L P T P +DWN    N P
Sbjct: 39  NQALPPITYPPSDWNCPQYNAP 60


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 9   RIAYQTHCQLHS*SHDP 59
           +I  QTH  +H   HDP
Sbjct: 95  KIEQQTHSSIHQHHHDP 111


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +1

Query: 238 NPELKPPTKPEADWNLYICNLP 303
           N  L P T P +DWN    N P
Sbjct: 30  NQALPPITYPPSDWNCPQYNAP 51


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 9   RIAYQTHCQLHS*SHDP 59
           +I  QTH  +H   HDP
Sbjct: 246 KIEQQTHSSIHQHHHDP 262


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 9   RIAYQTHCQLHS*SHDP 59
           +I  QTH  +H   HDP
Sbjct: 305 KIEQQTHSSIHQHHHDP 321


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 7/15 (46%), Positives = 14/15 (93%)
 Frame = +1

Query: 208 KTLKVSHALLNPELK 252
           KTL++++ L++P+LK
Sbjct: 126 KTLEINYKLIDPDLK 140


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 349 GRIINSRIAAGIAFVLYEHQY 411
           GRI N R+    + + Y HQ+
Sbjct: 212 GRISNRRVFISFSKICYLHQH 232


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 349 GRIINSRIAAGIAFVLYEHQY 411
           GRI N R+    + + Y HQ+
Sbjct: 230 GRISNRRVFISFSKICYLHQH 250


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +2

Query: 23  NSLSITFLKS*PRI*CFLYFQQWANWRV 106
           NSLS T  K         Y+  W+ +RV
Sbjct: 74  NSLSATSKKDKDGYKVVCYYTNWSQYRV 101


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -1

Query: 213 SLILHQ*TVERFTSFNCIVRTCVLDESIASI 121
           +LI+ +  VE    + C+V   V  ES+ ++
Sbjct: 291 TLIIREAKVEDSGKYLCVVNNSVGGESVETV 321


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,796
Number of Sequences: 336
Number of extensions: 1983
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9490410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)