Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301A03f
         (314 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   2.3  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   4.0  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    20   5.4  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    20   5.4  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    20   5.4  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           20   5.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   7.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   7.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   7.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   7.1  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    19   9.4  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 2.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 47  WEDGEEALSEEVLRMPTDE 103
           WE GEE   EE  ++  DE
Sbjct: 14  WEGGEEGSPEEGDKLEGDE 32


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 251 VSNVIELLDVDPQEEE 298
           +S+VIE+++ DP   E
Sbjct: 22  ISDVIEVIETDPDFHE 37


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 136 FIVQKSGSTYDFISWH 89
           F  Q   ST+DF+S H
Sbjct: 244 FTEQSVTSTFDFLSLH 259


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 136 FIVQKSGSTYDFISWH 89
           F  Q   ST+DF+S H
Sbjct: 244 FTEQSVTSTFDFLSLH 259


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 10/40 (25%), Positives = 23/40 (57%)
 Frame = -2

Query: 304 VFFLLLRIHV*KFNDVRYEIR*RLIDLDFLRVFFNFIVLS 185
           VF  ++ +   K++ + +EI  +L   D  R F+ F++++
Sbjct: 83  VFVTMMTLKRHKWSTL-FEILLKLESKDLSRTFYGFVIVA 121


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 136 FIVQKSGSTYDFISWH 89
           F  Q   ST+DF+S H
Sbjct: 244 FTEQSVTSTFDFLSLH 259


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = +2

Query: 2    NHNITMATTLEDKSIWEDG 58
            NH  ++A+++  K ++E+G
Sbjct: 1505 NHRNSVASSIPAKDVFENG 1523


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = +2

Query: 2    NHNITMATTLEDKSIWEDG 58
            NH  ++A+++  K ++E+G
Sbjct: 1505 NHRNSVASSIPAKDVFENG 1523


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = +2

Query: 2    NHNITMATTLEDKSIWEDG 58
            NH  ++A+++  K ++E+G
Sbjct: 1505 NHRNSVASSIPAKDVFENG 1523


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = +2

Query: 2    NHNITMATTLEDKSIWEDG 58
            NH  ++A+++  K ++E+G
Sbjct: 1505 NHRNSVASSIPAKDVFENG 1523


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 226 LDFLRVFFNF 197
           +DF+  FFNF
Sbjct: 62  MDFIAYFFNF 71


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,667
Number of Sequences: 336
Number of extensions: 847
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5836655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)