Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0039
(639 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 26 0.30
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 24 1.2
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 24 1.2
AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory recept... 22 3.8
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 22 5.0
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 5.0
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 6.6
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 21 6.6
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 8.7
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 8.7
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 8.7
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 8.7
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 8.7
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 25.8 bits (54), Expect = 0.30
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +2
Query: 362 AGWRSNGFTCICLCTIGSAKWKARLHVHSC 451
AG SNG C CL T SAK + + SC
Sbjct: 181 AGKASNGNKCCCLRTCSSAK-RPKFENSSC 209
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/39 (25%), Positives = 15/39 (38%)
Frame = +3
Query: 60 RIRTSKCRFSQSYRHLIGHERQRSGGSNQLLLRATQRTC 176
R+ KC F Y+H + + + GS TC
Sbjct: 230 RLTCPKCPFITEYKHHLEYHLRNHAGSKPFQCNKCDYTC 268
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 23.8 bits (49), Expect = 1.2
Identities = 13/43 (30%), Positives = 16/43 (37%)
Frame = +3
Query: 252 YVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRM 380
+ WA G V+ YS V DTSL GR+
Sbjct: 475 FTNGWANGTLAKLSPKVLEPLYSGNLAVSVATPNDTSLVRGRL 517
>AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory receptor
candidate 36 protein.
Length = 355
Score = 22.2 bits (45), Expect = 3.8
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -2
Query: 47 NKTTGWTFTLILSSC 3
N GWT LIL+ C
Sbjct: 221 NDIFGWTLILILAKC 235
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.8 bits (44), Expect = 5.0
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = -3
Query: 358 VSRVTWTGSRHSRE*YSCITEEWLVTSLPVAHQPTYFQRN 239
+ +T+ S+H E S I ++V + + TYF N
Sbjct: 1247 IGLITFVMSQHCVELVSMIKARFVVVNQQIGGIVTYFSTN 1286
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.8 bits (44), Expect = 5.0
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 520 WRSRVERRGRGLGPGAGD 573
WRS + +G G G G+G+
Sbjct: 516 WRSSDDAKGGGGGSGSGN 533
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.4 bits (43), Expect = 6.6
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +2
Query: 89 TELSAPYWARATKEWWK*PTASACHTKNMPIKSKRNLITRWMFTS*T 229
TE P W WW T S T ++R TR TS T
Sbjct: 1028 TEHMHPDWTTKPSTWWSSTTTSPWWTTT---TTRRTTTTRPTTTSTT 1071
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 341 PCYSGHFAGWRSNGFTCIC 397
PC +G + N F CIC
Sbjct: 76 PCENGGTCVDKINAFQCIC 94
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.0 bits (42), Expect = 8.7
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2
Query: 383 FTCICLCTIGSAKWKARLHVH 445
+ C+ +GSA AR++V+
Sbjct: 489 YRCVASSKVGSADHSARINVY 509
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 8.7
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +1
Query: 367 LEVEWVYVHMFVYHWEC 417
LE +++MFV W+C
Sbjct: 291 LEQSRYFIYMFVSVWKC 307
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 8.7
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +1
Query: 367 LEVEWVYVHMFVYHWEC 417
LE +++MFV W+C
Sbjct: 291 LEQSRYFIYMFVSVWKC 307
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.0 bits (42), Expect = 8.7
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +1
Query: 367 LEVEWVYVHMFVYHWEC 417
LE +++MFV W+C
Sbjct: 291 LEQSRYFIYMFVSVWKC 307
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.0 bits (42), Expect = 8.7
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +1
Query: 367 LEVEWVYVHMFVYHWEC 417
LE +++MFV W+C
Sbjct: 291 LEQSRYFIYMFVSVWKC 307
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,671
Number of Sequences: 336
Number of extensions: 3669
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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