Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0019
         (828 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    27   0.14 
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    26   0.42 
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    24   1.3  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    24   1.3  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    24   1.3  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   6.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 27.5 bits (58), Expect = 0.14
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 733 YVCRCGIFYNSYCNRKMFFD 792
           YVCR G+ Y+  C   M FD
Sbjct: 576 YVCRSGLSYHLSCAENMMFD 595


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 25.8 bits (54), Expect = 0.42
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
 Frame = -1

Query: 240 FVHYYDC---ILYFYNHKFRQDYTIKNINRDKQYLIYSQFDNR--RQEQKFD 100
           F+ Y  C   +LY+   K    +  KN+  DK +L +  F N   R+E  F+
Sbjct: 2   FLAYIACFLLLLYYIYSKHYSYWQSKNVPTDKPFLFFGSFYNLVIRKEHIFE 53


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = -1

Query: 618 LYKQ*LTVSRDRRLFFYC--LMGGRVHSPPGVKW 523
           ++ + L V    RLFFYC  L  G ++    +KW
Sbjct: 93  IFAKGLNVIEANRLFFYCSGLASGYLYLKLAMKW 126


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = -1

Query: 618 LYKQ*LTVSRDRRLFFYC--LMGGRVHSPPGVKW 523
           ++ + L V    RLFFYC  L  G ++    +KW
Sbjct: 93  IFAKGLNVIEANRLFFYCSGLASGYLYLKLAMKW 126


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = -1

Query: 618 LYKQ*LTVSRDRRLFFYC--LMGGRVHSPPGVKW 523
           ++ + L V    RLFFYC  L  G ++    +KW
Sbjct: 93  IFAKGLNVIEANRLFFYCSGLASGYLYLKLAMKW 126


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +1

Query: 316 ASKLHVYEKRI*QNMRHVPFSKLLNYC 396
           ++ L+++++   QNM H   S ++N C
Sbjct: 308 SNDLNMHQQHHQQNMSHEELSAMVNRC 334


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,934
Number of Sequences: 336
Number of extensions: 4985
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)