Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30007
         (626 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   6.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   6.4  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   8.4  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   8.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   8.4  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   8.4  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 495 FDVCILLEFVDEVPKENPVLIAGMLFIVLVA 403
           FD+C+L E VD V   N +    +LF++  A
Sbjct: 209 FDICLLKEGVDLV---NDIFGWQILFLITYA 236


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 495 FDVCILLEFVDEVPKENPVLIAGMLFIVLVA 403
           FD+C+L E VD V   N +    +LF++  A
Sbjct: 209 FDICLLKEGVDLV---NDIFGWQILFLITYA 236


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 330 ENGLDGSNLNIDDPDT 283
           ENG  G+ +  +DPDT
Sbjct: 371 ENGEGGAWVGYEDPDT 386


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
 Frame = +2

Query: 113 PIFRDYEAYLKEIQEEYHGPDGDCSEIE------TKKNVNSETKNPVEKSKNGIFSESSR 274
           PIF  + +Y+ +I +EY       +E +      T  N+  +++   + + N  + +S  
Sbjct: 397 PIFYRWHSYIDDIFQEYKATLPRYTENQLNYPGITVSNIEVQSQGSSKNTFNTFWQQSDV 456

Query: 275 DLT 283
           DL+
Sbjct: 457 DLS 459


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 182 NHHLVHDTLPVFLLNMLH 129
           NH +V   + +++LNM H
Sbjct: 330 NHRVVFTAMGLYVLNMEH 347


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = -2

Query: 451 REPCAYCWNAIYSACSCIYTKR 386
           R  C +C N +  AC    T R
Sbjct: 500 RMTCLFCINVLAEACGSDITTR 521


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,196
Number of Sequences: 336
Number of extensions: 2850
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)