Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30039
         (772 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   2.0  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   2.7  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   3.6  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    22   6.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.2  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   8.2  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -1

Query: 715 WCSWALNVEITAADVIDGFIVDHESTVRVLKGCVGGE 605
           W + ALN  +   +V   F++  E  +R ++  VG E
Sbjct: 151 WATDALNPSVYTYEVSPVFVLMEEVVLREMRAIVGFE 187


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -2

Query: 420 QRACGFCPKPNLRFPFQWCSDHGHSCW 340
           Q  C +   PN       C+D   SCW
Sbjct: 15  QLECNWSSGPNATLQSSACTDDLSSCW 41


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +3

Query: 345 NYARGHYTIGKEIVDLVLDRIRKLADQCTG 434
           +YAR     G  IVD+ LD  R L   CTG
Sbjct: 392 SYARAKGLGGIAIVDITLDDFRGL---CTG 418


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 233 RGTCLPAPVSLKKVLKES 180
           RGTC P    LKK L ++
Sbjct: 53  RGTCSPDGEELKKALPDA 70


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 686  YGGRCHRWLHC 654
            Y G C R+LHC
Sbjct: 1287 YPGDCTRYLHC 1297


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 666 SMTSAAVISTLSAQLHQPESSHRTDC 743
           S + A+V S  SA LH P      DC
Sbjct: 41  SGSPASVASNASAPLHIPAKRAAYDC 66


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,501
Number of Sequences: 336
Number of extensions: 4145
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)