Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00031
         (751 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.0  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   2.6  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    22   6.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.0  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   8.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.0  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   8.0  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 679 FELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNK 563
           +   G+  A   V  I+   D+D NG  N + ++K+  K
Sbjct: 56  YSFIGVNDADWSVLVIDPELDVDQNGFRNFTNLKKTHPK 94


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -1

Query: 532 GRLSKEEISVWLMRQRSTETRMTSKRRPSRPRMHWNLT 419
           GR   + I +W M Q  + TR+  K     P + W  T
Sbjct: 389 GRSEGDFIKLWDMFQNESLTRLYKKAGKEIPVILWTST 426


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 413 SMKSTMEDEKLKEKISDSD 357
           S+ S  EDE+++ ++SD D
Sbjct: 18  SLLSKKEDEEVEHRLSDRD 36


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/59 (18%), Positives = 29/59 (49%)
 Frame = -1

Query: 652  PRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEISVWLMRQRSTE 476
            P+G  +  +  +I ANG+L+  +I+++   ++ +           ++ S+ ++ Q   E
Sbjct: 839  PKGDNRYTIREEILANGVLSGLSIKRTERSDSALFTCVATNAFGSDDTSINMIVQEVPE 897


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -1

Query: 289 RRSMSTSRKNWKHLQSDN 236
           R S    RK WKHL   N
Sbjct: 73  RFSSGVGRKAWKHLDFRN 90


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -1

Query: 289 RRSMSTSRKNWKHLQSDN 236
           R S    RK WKHL   N
Sbjct: 73  RFSSGVGRKAWKHLDFRN 90


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 745 PEYSPSI*GERAMTKDNNLLGKFELTG 665
           P+Y  S   +  M   NN+ G +++TG
Sbjct: 315 PDYLNSQTTQNHMQAMNNMAGTYQMTG 341


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 313 WIPTSWPTRRSMSTSRKNWKH 251
           W   S+P+  +M+T  K  KH
Sbjct: 382 WCKQSFPSLAAMTTHMKEAKH 402


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 170 PEPEVPPPGLEALAPPS 120
           P P+VPP  L  + PP+
Sbjct: 176 PLPQVPPLPLPPIFPPT 192


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,126
Number of Sequences: 336
Number of extensions: 3155
Number of successful extensions: 19
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)