Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00024
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      33   0.002
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      33   0.002
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    27   0.13 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.54 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           25   0.71 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    24   0.94 
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    24   0.94 
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   2.2  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   2.2  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   2.2  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   5.0  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   6.6  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   6.6  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   6.6  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   8.7  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   8.7  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   8.7  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 33.5 bits (73), Expect = 0.002
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +3

Query: 276 DFDKLRQNINKADKNEPKVDEDEKHIS-KNNRSDDKNDQDVENTNNK 413
           +FD L  N  +++K E K D+    +  KNN  D KN+QD  N   K
Sbjct: 429 NFDALIVNEMRSEKPESKKDKKGSQVDHKNNLGDSKNNQDGNNGEKK 475



 Score = 22.6 bits (46), Expect = 2.9
 Identities = 15/60 (25%), Positives = 28/60 (46%)
 Frame = +3

Query: 318 NEPKVDEDEKHISKNNRSDDKNDQDVENTNNKLDEQEMSNKTDSGSKNDKNSTKVDETEV 497
           +E KV +DE       RS   ++   E  ++ +D  E   K+     ++KN ++ D + V
Sbjct: 16  DEVKVFKDEGDGEDEKRS---SENLTEEKSSLIDLTESEEKSGGSYSSNKNVSRADHSPV 72



 Score = 21.4 bits (43), Expect = 6.6
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = +3

Query: 336 EDEKHISKNNRSDDKNDQDVENTNNKLDEQEMSNKTDSGSKNDKNSTKVD 485
           EDEK  S+N   +  +  D+  +  K      SNK  S + +     KV+
Sbjct: 28  EDEKRSSENLTEEKSSLIDLTESEEKSGGSYSSNKNVSRADHSPVFGKVE 77


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 33.5 bits (73), Expect = 0.002
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +3

Query: 276 DFDKLRQNINKADKNEPKVDEDEKHIS-KNNRSDDKNDQDVENTNNK 413
           +FD L  N  +++K E K D+    +  KNN  D KN+QD  N   K
Sbjct: 321 NFDALIVNEMRSEKPESKKDKKGSQVDHKNNLGDSKNNQDGNNGEKK 367


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +3

Query: 261 EVVDDDFD--KLRQNINKADKNEPKVDEDEKHISKNNRSDDKNDQDVENTNNKLDEQEMS 434
           E+ DD+ +  K  +     DK++PK+++  +   ++ + +DK  +  +    K  E E  
Sbjct: 222 ELSDDEAEEEKKEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKK--KTIKEKYTEDEEL 279

Query: 435 NKT 443
           NKT
Sbjct: 280 NKT 282



 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/60 (18%), Positives = 23/60 (38%)
 Frame = +3

Query: 315 KNEPKVDEDEKHISKNNRSDDKNDQDVENTNNKLDEQEMSNKTDSGSKNDKNSTKVDETE 494
           + E ++ +DE    K     +  D+D     +  ++++   K +   K      K  E E
Sbjct: 218 EREKELSDDEAEEEKKEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDE 277


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 12/50 (24%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -3

Query: 646 VLILIYFWTNFIIFWVIQFMFFLTVDGSV-LVILTIVMYIIIRIMSVLAI 500
           +L   YF+  FII   + + ++  +  +V L+ L  + Y ++ +  +L I
Sbjct: 97  LLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCI 146


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 16/56 (28%), Positives = 23/56 (41%)
 Frame = +3

Query: 324 PKVDEDEKHISKNNRSDDKNDQDVENTNNKLDEQEMSNKTDSGSKNDKNSTKVDET 491
           PK   DE+    N  S   N     N NN  +    +N  D  ++N+ +S    ET
Sbjct: 355 PKRSSDEQQWRNNQPSTSNNRWHNNNGNNSNNHWRKNNPND--NRNNTSSRAQGET 408



 Score = 24.2 bits (50), Expect = 0.94
 Identities = 16/65 (24%), Positives = 25/65 (38%)
 Frame = +3

Query: 279 FDKLRQNINKADKNEPKVDEDEKHISKNNRSDDKNDQDVENTNNKLDEQEMSNKTDSGSK 458
           F K   +  +   N+P    +  H   NN  ++ N+   +N  N       S      S+
Sbjct: 354 FPKRSSDEQQWRNNQPSTSNNRWH---NNNGNNSNNHWRKNNPNDNRNNTSSRAQGETSR 410

Query: 459 NDKNS 473
           N KNS
Sbjct: 411 NSKNS 415


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 9/49 (18%), Positives = 25/49 (51%)
 Frame = -3

Query: 646 VLILIYFWTNFIIFWVIQFMFFLTVDGSVLVILTIVMYIIIRIMSVLAI 500
           +++L+ F  +F++  +  F F   V    L  ++++  I+  +  V+ +
Sbjct: 525 IVLLLMFGVSFVVIVITIFFFTANVQAGELYFMSLLNPILSNVTFVIDV 573


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 9/49 (18%), Positives = 25/49 (51%)
 Frame = -3

Query: 646 VLILIYFWTNFIIFWVIQFMFFLTVDGSVLVILTIVMYIIIRIMSVLAI 500
           +++L+ F  +F++  +  F F   V    L  ++++  I+  +  V+ +
Sbjct: 250 IVLLLMFGVSFVVIVITIFFFTANVQAGELYFMSLLNPILSNVTFVIDV 298


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = +3

Query: 327 KVDEDEKHISKNNRSDDKNDQDVENTNNK 413
           K+D++E H S ++  DD +D D+ N+ N+
Sbjct: 278 KIDKEE-HESMDD--DDDDDDDMSNSENQ 303


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -3

Query: 181 PLNSSSYPNRHHLHMQARKREMFHYPH 101
           PL + S  N H  H    +    H PH
Sbjct: 156 PLTTQSMNNHHMGHHMQEQHPQHHQPH 182


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -3

Query: 181 PLNSSSYPNRHHLHMQARKREMFHYPH 101
           PL + S  N H  H    +    H PH
Sbjct: 158 PLTTQSMNNHHMGHHMQEQHPQHHQPH 184


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 312 DKNEPKVDEDEKHIS 356
           D NE   DE+E HIS
Sbjct: 909 DPNEVTCDEEEGHIS 923


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +2

Query: 515 HNSNNDVHHDSENNQNRTVDSQEEHELYH 601
           + +N  +  D + NQN   +    +E+YH
Sbjct: 19  YKTNPFLASDCDKNQNTEQNYTHNNEMYH 47


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 8/49 (16%)
 Frame = +3

Query: 270 DDDFDKLRQNINKADKNEP-KVDEDEKH----ISKNNRS---DDKNDQD 392
           DDD D L  + +  +K+E  K D+ + H      +N +    DD ND D
Sbjct: 157 DDDDDALVSDSDDREKDEEDKRDDTDMHGRIKSERNGKDLDDDDMNDDD 205


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +2

Query: 515 HNSNNDVHHDSENNQNRTVDSQEEHELYH 601
           + +N  +  D + NQN   +    +E+YH
Sbjct: 19  YKTNPFLASDCDKNQNTEQNYTHNNEMYH 47


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -2

Query: 644 PHFDLLLDQFHNFL 603
           PH  LLLD   NFL
Sbjct: 216 PHRGLLLDTARNFL 229


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +1

Query: 82  YAILEKNVDNETFHVYEPAYVDDVDWDMMSYSKDCYIEVACLKT-THACNSHP 237
           YA  +  VD  T  VY    V+D DW ++    +  ++    +  T+   +HP
Sbjct: 41  YAQEDLPVDLCTHIVYSFIGVNDADWSVLVIDPELDVDQNGFRNFTNLKKTHP 93


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +2

Query: 515 HNSNNDVHHDSENNQNRTVDSQEEHELYH 601
           + +N  +  D + NQN   +    +E+YH
Sbjct: 19  YKTNPFLASDCDKNQNTEHNYTHNNEMYH 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,470
Number of Sequences: 336
Number of extensions: 2719
Number of successful extensions: 25
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)