Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00016
         (703 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   1.8  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    23   3.2  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   3.2  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   4.2  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   5.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.6  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   5.6  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 672 QSEDDGHQFNGGDHDGDRAD 613
           ++ DD     GG  DGDR D
Sbjct: 86  ENNDDSGGGRGGGRDGDRGD 105


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 250 SSCILRMLRCHQGEQLHACHL 312
           SS + + LR H GE+ + C L
Sbjct: 90  SSTLTKHLRIHSGEKPYECKL 110



 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 244 SLSSCILRMLRCHQGEQLHACHL 312
           S SS +   +R H GE+ + C L
Sbjct: 60  SQSSSVTTHMRTHSGERPYRCRL 82


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 250 SSCILRMLRCHQGEQLHACHL 312
           SS + + LR H GE+ + C L
Sbjct: 346 SSTLTKHLRIHSGEKPYECKL 366



 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 244 SLSSCILRMLRCHQGEQLHACHL 312
           S SS +   +R H GE+ + C L
Sbjct: 316 SQSSSVTTHMRTHSGERPYRCRL 338


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 77  KFTATHFVVKLCTYV 33
           KFT  H +  LCT++
Sbjct: 105 KFTPEHIIPDLCTHI 119


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 283 DGTAASEECKMKAMP 239
           DG+ A +ECK   MP
Sbjct: 470 DGSVAPKECKQDFMP 484


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = +1

Query: 448 CHRA*IQLLWSNGSGLVPILALPNTCC 528
           C+   ++ +WS    L+P+  +P   C
Sbjct: 225 CYAVIVRTIWSKSKLLIPVGHIPIRQC 251


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +1

Query: 112 HLRWQVSLCWASD 150
           HL W   +CW S+
Sbjct: 753 HLDWNYPVCWQSN 765


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 428 QDQDTFHVIEHRFSCCGPTGPGSYL 502
           Q+  T H + + FSC  P+G   Y+
Sbjct: 232 QNGGTCHDLVNSFSCSCPSGTLGYI 256


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,327
Number of Sequences: 336
Number of extensions: 3577
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)