Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_A08
         (614 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     26   0.22 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.2  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   2.7  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   6.2  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   6.2  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   8.2  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 26.2 bits (55), Expect = 0.22
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 330 VLYNEDRPCPRDCI 371
           VL NED PC R C+
Sbjct: 36  VLLNEDNPCARKCV 49


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +1

Query: 175  TTWGQGPGSYYCSWQHARWY 234
            T+W  G  + Y  WQ   W+
Sbjct: 1356 TSWNPGSTTNYPEWQPTEWH 1375


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 142 ITVTLDFWNLALRSSDVLTRSMKEKQ 65
           +   LDF  LAL  S +LT   K++Q
Sbjct: 66  VQTCLDFLLLALNISTILTTVRKQQQ 91


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 94  HRYYAVQDSKNQV*P 138
           H++Y+ + S+NQV P
Sbjct: 481 HQFYSSESSQNQVAP 495


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 94  HRYYAVQDSKNQV*P 138
           H++Y+ + S+NQV P
Sbjct: 429 HQFYSSESSQNQVAP 443


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -1

Query: 452 RISSPNFCVPISRKLHLACLYPLRYRAY 369
           ++S PN CV   R L       + YR +
Sbjct: 130 KLSDPNQCVICHRVLSCKSALQMHYRTH 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,985
Number of Sequences: 336
Number of extensions: 2841
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)