Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a10f
         (628 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    26   0.22 
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    26   0.22 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    26   0.22 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    26   0.22 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   1.6  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    23   2.1  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    23   2.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.7  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   3.7  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   8.4  

>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 26.2 bits (55), Expect = 0.22
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 161 KVYPSPGAARGVWALP 208
           KVYP+P   R VW LP
Sbjct: 87  KVYPTPYGGRLVWTLP 102


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 26.2 bits (55), Expect = 0.22
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 161 KVYPSPGAARGVWALP 208
           KVYP+P   R VW LP
Sbjct: 401 KVYPTPYGGRLVWTLP 416


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 26.2 bits (55), Expect = 0.22
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 161 KVYPSPGAARGVWALP 208
           KVYP+P   R VW LP
Sbjct: 634 KVYPTPYGGRLVWTLP 649


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 26.2 bits (55), Expect = 0.22
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 161 KVYPSPGAARGVWALP 208
           KVYP+P   R VW LP
Sbjct: 634 KVYPTPYGGRLVWTLP 649


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +1

Query: 421 GPAWLYSRTLGIA*WERGGHAIPRGKISSCRSFLSWHSG 537
           GPA ++ R   I      G     GK S  ++ L WH+G
Sbjct: 303 GPAGVHLRKKNIHSCHIPGCGKVYGKTSHLKAHLRWHTG 341


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 175 TWIYLATHGEADAPRYSRVLAV 110
           T +Y AT+G ++A  Y+R + V
Sbjct: 277 TSLYAATYGGSEAGPYTRAMGV 298


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 175 TWIYLATHGEADAPRYSRVLAV 110
           T +Y AT+G ++A  Y+R + V
Sbjct: 277 TSLYAATYGGSEAGPYTRAMGV 298


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +2

Query: 203  LPQPPPCTMAAEESLPQGSPMSPDAPVAPP 292
            + + PP   A EE   +  P    + V PP
Sbjct: 1778 IDEEPPSVEAVEEEREEAPPSVHSSTVVPP 1807



 Score = 21.4 bits (43), Expect = 6.4
 Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = +2

Query: 206  PQPPPCTMAAEESL-PQGSPMSPDAPV 283
            P+   C   A  ++ P  +PM PD PV
Sbjct: 2279 PENTECHPDASSTMAPSTTPMVPDKPV 2305


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 175 TWIYLATHGEADAPRYSRVLAV 110
           T +Y  T+G +DA  Y+R + V
Sbjct: 276 TSLYAGTYGGSDAGPYTREMGV 297


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 291 GGATGASGDMGEPCGRDSSAAI 226
           GG+   + D GEP GR +   +
Sbjct: 160 GGSFTVTQDRGEPLGRGTKIVL 181


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,413
Number of Sequences: 336
Number of extensions: 3734
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)