Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a04f
         (664 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   1.7  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   3.9  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   3.9  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   6.8  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   6.8  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -2

Query: 594 FRKVVELHRSTKIKKHVCQIRTFSCQLVED 505
           FR+ + LH +  +++ +   RTF C  V D
Sbjct: 23  FRRGLRLHDNPSLREGLKGARTFRCVFVLD 52


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 437 SANSDSRELTCNPDISGLKLTC 372
           S N  +R   C+PD+  + L C
Sbjct: 709 SGNRLARPANCSPDLYAVMLNC 730


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +2

Query: 530 VLI*HTCFLILVLRCNSTTFR 592
           +L+  + FL  +L CN+TT+R
Sbjct: 142 ILLWISFFLNFMLHCNNTTWR 162


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 296 VRYEKMFNKTLSGSFSMVVIC 234
           V Y +M+ + + G+F+ V IC
Sbjct: 432 VEYFQMYAQFIVGTFNSVFIC 452


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 352 YDTKLWTHVSLRPEIS 399
           Y+ +  +HVSLRP +S
Sbjct: 281 YEYRSLSHVSLRPPLS 296


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,742
Number of Sequences: 336
Number of extensions: 3597
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)