Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a01r
         (764 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.7  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   2.7  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   2.7  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 664 YTNSGSWSYPTPRCSETP 611
           Y N  S+S P P  S TP
Sbjct: 391 YANMNSYSVPEPTISTTP 408


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 695 DIKQSTASQEIHKLRKLELSYAEVLR 618
           DIK+    Q++ +++ LE    EVLR
Sbjct: 348 DIKKKPTYQDLQEMKYLERCVKEVLR 373


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 695 DIKQSTASQEIHKLRKLELSYAEVLR 618
           DIK+    Q++ +++ LE    EVLR
Sbjct: 348 DIKKKPTYQDLQEMKYLERCVKEVLR 373


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,192
Number of Sequences: 336
Number of extensions: 3019
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)