Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_B08
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   6.7  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   6.7  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   8.9  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   8.9  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   8.9  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   8.9  

>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -1

Query: 147 CPHTFIDVLHPSGEGW 100
           CP+ +  +L P+G+G+
Sbjct: 516 CPNNYPWILEPTGDGF 531


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -2

Query: 470 LPXVGLLCAVVPPPPGV 420
           LP  G LC   PP P V
Sbjct: 164 LPPTGFLCNNYPPLPQV 180


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -1

Query: 147 CPHTFIDVLHPSGEGW 100
           CP+ +  +L P+G+G+
Sbjct: 509 CPNNYPWILDPTGDGF 524


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 249 LCLTKISESIHCNMHVNV 302
           LCL + S+S + N H+ V
Sbjct: 110 LCLLRFSQSGNLNRHMRV 127


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 249 LCLTKISESIHCNMHVNV 302
           LCL + S+S + N H+ V
Sbjct: 366 LCLLRFSQSGNLNRHMRV 383


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 648 TNFSFQRWQISWWXSSGW 595
           T++   R + SW+ +SGW
Sbjct: 281 TSWGKSRDESSWFYNSGW 298


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,788
Number of Sequences: 336
Number of extensions: 3112
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)