Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_B03
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   2.9  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   3.8  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   8.9  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   8.9  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   8.9  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 396 EVVETLFN*VRRCRLNRTLMLKNSCKYKKRN 488
           ++VE   N +R C ++R L + + C  K  N
Sbjct: 62  KIVEMAANGIRPCVISRQLRVSHGCVSKILN 92


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = +2

Query: 527 LEPWFNYIQWVEQSFPKHGHEXHID 601
           L P  NYI    QSFP       ID
Sbjct: 461 LTPQLNYISMKLQSFPLLSQRHQID 485


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -2

Query: 160 VIISFEIVKKISDDQAEAPK 101
           +++  E  K++SDD+AE  K
Sbjct: 213 LVVEKEREKELSDDEAEEEK 232


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 25  RTHAFIKFKTSHRQQLL*SNV 87
           R  A + FKT HR+ L+ + V
Sbjct: 448 REKALLDFKTGHRKVLVATGV 468


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -3

Query: 288 TDLIVLNFCHYFKC*APDLHFYFTQAQFLSIII 190
           TD++   +   +   A  L+F F    FL +I+
Sbjct: 134 TDILGFGYFREYLAEAVQLYFQFYYTYFLCVIV 166


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,917
Number of Sequences: 336
Number of extensions: 2617
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)