Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_A05
         (928 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   4.5  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   7.8  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   7.8  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   7.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   7.8  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -3

Query: 365 YQYISLMIHLCCTSSITYSMFV*CLTVNDASICKFSLFVINISVL 231
           YQ I L+I  CC  +++        T+N        +F+ N+S+L
Sbjct: 243 YQII-LVIFDCCLETVSALNGAFLYTINGQGQFNIEMFLCNMSLL 286


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 566 KNKDVEDKPALIN 604
           KN+D+ED+P + N
Sbjct: 183 KNEDLEDQPVVYN 195


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 606 VFISAGLSSTSLFFSVTVPDNGE*ISLAA 520
           V +S G    S++ +  + ++GE ISLA+
Sbjct: 42  VVLSLGSFIVSVYLTTKIDNDGESISLAS 70


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +2

Query: 566 KNKDVE-DKPALINTSCYDKGWLFRLKIIKQSEINDL 673
           KN+  E  K   I TSC   G L+R+       +ND+
Sbjct: 187 KNRFKELQKYLKIETSCRYVGTLYRILTTMMEMVNDI 223


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 625 SFVITRCIY*CWFVFYIF 572
           +F+I  C+Y  ++ F IF
Sbjct: 106 AFIILLCVYYFYYAFIIF 123


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,571
Number of Sequences: 336
Number of extensions: 4209
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25961683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)