Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_A24
         (676 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   3.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.0  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   4.0  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = -1

Query: 658 KVNSFFFTTFNWLRKLNSAAFFWSLANLFSYLETFFSVGLTNL 530
           K+N+FF          N     + +  +FS+  TFFS  +  L
Sbjct: 11  KLNTFFLKALTVWHVENPTYRLYKIFVVFSFAVTFFSAWICAL 53


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 414 DYHERIARLEDEKFDLEYIVKR 479
           DYH    R     F +EY+V R
Sbjct: 835 DYHGAWERQTGHNFTMEYLVSR 856


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -2

Query: 105 LLLCWFRVSYCKN*KMALRDGLANTSHS 22
           ++L  FR++  +N ++A R  +AN S S
Sbjct: 403 VMLMQFRLTLMRNAQLAARRAIANVSVS 430


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,303
Number of Sequences: 336
Number of extensions: 2093
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)