Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_A02
         (673 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   2.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.3  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   2.3  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   6.9  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.2  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   9.2  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   9.2  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 362 LSRNVH*TIAQERWCQQNAYKEW 430
           ++R +H      RWC QN  + W
Sbjct: 571 VARGIHAEALVPRWCYQNEGECW 593


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
 Frame = -3

Query: 581 VVKVSDLFFTYRSEQINN*KT*FQQQKI----IYSTNTVIKT--KIATVYIYKLSLTTLY 420
           +VK+  + F   ++QINN    FQ+ KI       TN  + T  KI  ++ +   L  L+
Sbjct: 460 LVKMLKIRFVILNKQINNLIEYFQKNKIGPVETKGTNKQLNTLNKICALHHHLSKLVKLF 519

Query: 419 RHSAGTNVL 393
             + G  +L
Sbjct: 520 NETFGIVLL 528



 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/18 (50%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = +3

Query: 330 KFMPAGLMFCLSV-GMFT 380
           KF P+ L FCL++  +FT
Sbjct: 311 KFRPSSLRFCLNILSIFT 328


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
 Frame = -3

Query: 581 VVKVSDLFFTYRSEQINN*KT*FQQQKI----IYSTNTVIKT--KIATVYIYKLSLTTLY 420
           +VK+  + F   ++QINN    FQ+ KI       TN  + T  KI  ++ +   L  L+
Sbjct: 185 LVKMLKIRFVILNKQINNLIEYFQKNKIGPVETKGTNKQLNTLNKICALHHHLSKLVKLF 244

Query: 419 RHSAGTNVL 393
             + G  +L
Sbjct: 245 NETFGIVLL 253



 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/18 (50%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = +3

Query: 330 KFMPAGLMFCLSV-GMFT 380
           KF P+ L FCL++  +FT
Sbjct: 36  KFRPSSLRFCLNILSIFT 53


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -2

Query: 654 LINSIGCYT*FAPI 613
           ++N+  CYT  AP+
Sbjct: 72  IVNAFSCYTVLAPV 85


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 541 SERYVKNKSETFTTIRFVDEFLILNRCKLGI 633
           S  Y  NK+  F  + F ++F+I  +  L I
Sbjct: 567 SSNYFANKTYDFHNMSFENDFIIQPKHLLSI 597


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +3

Query: 318 YNSRKFMPAGLMFCLSVGMFTKLLLKNV 401
           Y  RK     L  CLSVGM  + ++  V
Sbjct: 235 YMRRKCQECRLKKCLSVGMRPECVVPEV 262


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -1

Query: 409 LAPTFLSNSLVNIPTERQNIRPAGMNF 329
           + PT+  NS+  +     N  P G +F
Sbjct: 23  MTPTYSMNSMSCVSMPSMNCSPQGASF 49


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,638
Number of Sequences: 336
Number of extensions: 3137
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)