Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0012
         (876 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   3.1  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   3.1  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   3.1  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   7.3  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    22   7.3  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.6  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   9.6  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = +2

Query: 188 DYRHHEQSVPNPAPPPSYFGNNHHRLP 268
           +Y ++   +PN    P ++ N H+  P
Sbjct: 21  NYYNYTSDIPNAQQMPPHYSNYHYEDP 47


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = +2

Query: 188 DYRHHEQSVPNPAPPPSYFGNNHHRLP 268
           +Y ++   +PN    P ++ N H+  P
Sbjct: 21  NYYNYTSDIPNAQQMPPHYSNYHYEDP 47


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = +2

Query: 188 DYRHHEQSVPNPAPPPSYFGNNHHRLP 268
           +Y ++   +PN    P ++ N H+  P
Sbjct: 21  NYYNYTSDIPNAQQMPPHYSNYHYEDP 47


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 120 DLNLCSKVNFITDNGRDDG 176
           D NLC+ VN+      DDG
Sbjct: 46  DANLCTHVNYAFLGLNDDG 64


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 487 VPYCMRSLKQPIITVLNVKHSSVLSPHLRFY 579
           VP+  RSL + I+T    K  +    HL  Y
Sbjct: 61  VPFIARSLGEDIVTYSGHKLKAGSMVHLHIY 91


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +1

Query: 235 FVLWQ*SPPPAGFVAPEAPPRTTVITSPQA 324
           FV W  S  P       AP  +T +  PQA
Sbjct: 21  FVRWLNSQQPRNVPNFAAPSTSTAVQRPQA 50


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -1

Query: 453 ESCRYNVCSVIWNIVHSGDYCFVARLTR 370
           E+  Y+V  ++W+IV +    F+  L R
Sbjct: 243 ETVAYSVIFILWHIVGTFSGIFLCDLIR 270


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,234
Number of Sequences: 336
Number of extensions: 3890
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)