Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0008
         (852 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    26   0.33 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.4  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   7.1  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   7.1  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 26.2 bits (55), Expect = 0.33
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1

Query: 663 PGTGACIPKSNRPYLHPPVPPF 598
           PG  A +P SN  Y+HP  P F
Sbjct: 97  PGGKAEVPPSNPIYIHPESPNF 118


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 663  PGTGACIPKSNRPYLHPPVPP 601
            PG+    P+      HPP+PP
Sbjct: 1360 PGSTTNYPEWQPTEWHPPIPP 1380


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 13  EQHRSDFIFYLHYFNIKYLLI 75
           +QH+SD+ FY  ++   Y L+
Sbjct: 49  KQHKSDY-FYFSFYITSYTLL 68


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 13  EQHRSDFIFYLHYFNIKYLLI 75
           +QH+SD+ FY  ++   Y L+
Sbjct: 49  KQHKSDY-FYFSFYITSYTLL 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,753
Number of Sequences: 336
Number of extensions: 3973
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)