Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0004
         (841 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   7.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   7.0  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   7.0  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   9.2  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +3

Query: 144 PASGQRRYXSGEGKEQIPERHRELRSH*AEAHGDVRKNPLP 266
           P  G +     EGK Q+PE  +++ +       D    PLP
Sbjct: 35  PLFGLKEQPKIEGKVQVPEALKKIYNIQNNFEYDTASLPLP 75


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
 Frame = +1

Query: 37  PSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKN---PLPDKDA-IXAEKEKNKFLNG 204
           P  EDV  ++ + +  +  +K  + + K+TE +E N   P+  ++A   +++E  +F   
Sbjct: 245 PKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKTKPIWTRNADDISQEEYGEFYKS 304

Query: 205 IEN 213
           + N
Sbjct: 305 LTN 307


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +3

Query: 192 IPERHRELRSH*AEAHGDVRKNPLPTKDV 278
           +PER++ +    A   G+     +P KD+
Sbjct: 35  LPERYKPIGVQIANRFGEQANEKIPLKDI 63


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 353 YFNIDVSQIDLRRPLQVLF 409
           +F ID    + R+P+++LF
Sbjct: 301 FFEIDRINAESRKPIRILF 319


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,023
Number of Sequences: 336
Number of extensions: 3172
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23140487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)