Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0034
         (626 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.4  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   8.4  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   8.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   8.4  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 379 GDGNHSPSGGP 347
           G GN+ P GGP
Sbjct: 530 GSGNNQPPGGP 540


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 466 IFFLSILQLSLVLAGEV 516
           +FF+S+L + LV  GEV
Sbjct: 309 LFFVSVLFILLVKEGEV 325


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 466 IFFLSILQLSLVLAGEV 516
           +FF+S+L + LV  GEV
Sbjct: 309 LFFVSVLFILLVKEGEV 325


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 466 IFFLSILQLSLVLAGEV 516
           +FF+S+L + LV  GEV
Sbjct: 309 LFFVSVLFILLVKEGEV 325


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 466 IFFLSILQLSLVLAGEV 516
           +FF+S+L + LV  GEV
Sbjct: 309 LFFVSVLFILLVKEGEV 325


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = +3

Query: 465 YFFSFYITAF 494
           ++FSFYIT++
Sbjct: 56  FYFSFYITSY 65


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -2

Query: 118 LFSTYLLIP*CRPLTLYE 65
           LF+ YLL     PL LYE
Sbjct: 134 LFTVYLLPIIINPLVLYE 151


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = +3

Query: 465 YFFSFYITAF 494
           ++FSFYIT++
Sbjct: 56  FYFSFYITSY 65


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,492
Number of Sequences: 336
Number of extensions: 2903
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)