Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0011
         (733 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    28   0.068
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    26   0.36 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    26   0.36 
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    22   4.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.8  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   7.8  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   7.8  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   7.8  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   7.8  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   7.8  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 28.3 bits (60), Expect = 0.068
 Identities = 8/26 (30%), Positives = 18/26 (69%)
 Frame = -3

Query: 332 VVRPISPIVISKCIAVFVIPYLSSRK 255
           V++  + ++I  C+A+F++PY   R+
Sbjct: 121 VMKNFAILIIPTCVAMFIVPYFQDRR 146


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
 Frame = -1

Query: 301 PNALLYSLFLIFLRGS*VALQSSHNLHSFHILHGCSF-CRTEYS*C*NRYWNVYELFQSI 125
           P  +   ++L++   + + L +    H  +  HG S+ C  +Y  C N   +    F  +
Sbjct: 117 PVKIRTKVYLVYCSSA-LVLAAMTTFHLIYEAHGFSYKCGIQYHIC-NTVISATVCFMML 174

Query: 124 Q--RYYRFFSILNEYFTI 77
                +R F+ILN Y TI
Sbjct: 175 LMLEIWRRFTILNNYLTI 192


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
 Frame = -1

Query: 301 PNALLYSLFLIFLRGS*VALQSSHNLHSFHILHGCSF-CRTEYS*C*NRYWNVYELFQSI 125
           P  +   ++L++   + + L +    H  +  HG S+ C  +Y  C N   +    F  +
Sbjct: 113 PVKIRTKVYLVYCSSA-LVLAAMTTFHLIYEAHGFSYKCGIQYHIC-NTVISATVCFMML 170

Query: 124 Q--RYYRFFSILNEYFTI 77
                +R F+ILN Y TI
Sbjct: 171 LMLEIWRRFTILNNYLTI 188


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
 Frame = +1

Query: 316 DIGLTTKVLDRLIIHQDPL--RTSCLDQDQDQCLGLYPIKTHSEEDLVRMALLCEDLTEW 489
           D+ LT +  D ++ +  P   +T        Q  G+ P+   S +++  + L      EW
Sbjct: 10  DLVLTIEASDAVLAYPQPSFHQTFSFVVIFGQFFGIMPLHGVSRKNVQEIRL------EW 63

Query: 490 RELKDIYALWTYKGQF 537
           +  + +YA++   G F
Sbjct: 64  KSFRFVYAVYNIFGAF 79


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = +2

Query: 482 QSGES*KIFMRCGLTKDSLKNIPREILHKIEPEYCGV 592
           +  E  K  ++C   K S  ++     H  E ++CGV
Sbjct: 369 KGAEQAKNVLKCVWCKQSFPSLAAMTTHMKEAKHCGV 405


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 648 NHAKNLRKWVSKSNDGGSN 704
           NH + LRK++ K+ D   N
Sbjct: 326 NHNEQLRKYLCKNEDETKN 344


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 648 NHAKNLRKWVSKSNDGGSN 704
           NH + LRK++ K+ D   N
Sbjct: 218 NHNEQLRKYLCKNEDETKN 236


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 365 TPSELHVWTR 394
           TP+ LH+W R
Sbjct: 208 TPNHLHIWPR 217


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 365 TPSELHVWTR 394
           TP+ LH+W R
Sbjct: 208 TPNHLHIWPR 217


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 365 TPSELHVWTR 394
           TP+ LH+W R
Sbjct: 208 TPNHLHIWPR 217


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 487 WRELKDIYALWTYKGQF 537
           W+  + +YAL+T  G F
Sbjct: 50  WKSARVVYALFTLLGTF 66


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 487 WRELKDIYALWTYKGQF 537
           W+  + +YAL+T  G F
Sbjct: 50  WKSARVVYALFTLLGTF 66


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,566
Number of Sequences: 336
Number of extensions: 4015
Number of successful extensions: 21
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)