Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20019
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    26   0.26 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    24   1.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   1.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.4  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   3.2  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   3.2  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   7.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.7  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   9.7  

>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
 Frame = +1

Query: 280 GMFVRLVHF*FQNETIKRTNAPVRSVV-YVILYVPCAILKFY------SLKRIIIF-HMV 435
           G+F  ++ F      + +T   V +V  +V  Y P A + FY      S++ III  H V
Sbjct: 82  GLFC-ILKFALDGLMLDKTGICVSNVFDFVHFYYPVATMSFYVLNFFGSIQFIIISKHWV 140

Query: 436 FLFKHYMF*RERFMRNLGGPI 498
            + K + F  E  MRN G  I
Sbjct: 141 TIMKEWSF-MEMSMRNYGSSI 160


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +2

Query: 434 CFYLNIICFNVNGLCEISVDRFCIISFSLKIKF 532
           C Y  I+ + ++ + ++ + +FC     LK KF
Sbjct: 163 CLYRWIVLYTLSKMSQVMLIQFCAFVVVLKQKF 195


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 607 YLYNKQLSLFTNK*YH*IYKNPYPRK 530
           YLY +Q S  T       Y+ PYPR+
Sbjct: 23  YLYWQQTSNLTTSKLLYTYRQPYPRQ 48


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/52 (25%), Positives = 28/52 (53%)
 Frame = +1

Query: 28  SIHLSYISCPVRSLTYIH*GEEETFVIGRINFLVLEILKFFICSLVLRVACV 183
           ++HL  + C +    Y+H      F+I  ++ L L  + +F C+L++ + C+
Sbjct: 249 TVHLLLLVC-IYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALII-LLCI 298


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 316 NETIKRTNAPVRSVVYVILYVPCAILKFY 402
           +ET    N  V+  VYVILY+   +   Y
Sbjct: 127 HETNLLRNVSVQFFVYVILYILATVFLAY 155


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 316 NETIKRTNAPVRSVVYVILYVPCAILKFY 402
           +ET    N  V+  VYVILY+   +   Y
Sbjct: 127 HETNLLRNVSVQFFVYVILYILATVFLAY 155


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +1

Query: 67  LTYIH*GEEETFVIGRINFLVLEILKFFICSLVLRV 174
           + YI   E ET   G +   VLE++    CS   RV
Sbjct: 249 IPYIQYTETETKTWGSVFNTVLELMPKHACSEYCRV 284


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/44 (25%), Positives = 21/44 (47%)
 Frame = +1

Query: 388 ILKFYSLKRIIIFHMVFLFKHYMF*RERFMRNLGGPILYNFLFL 519
           +L  + +  ++I   +F F   +   E +  +L  PIL N  F+
Sbjct: 527 LLLMFGVSFVVIVITIFFFTANVQAGELYFMSLLNPILSNVTFV 570


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/44 (25%), Positives = 21/44 (47%)
 Frame = +1

Query: 388 ILKFYSLKRIIIFHMVFLFKHYMF*RERFMRNLGGPILYNFLFL 519
           +L  + +  ++I   +F F   +   E +  +L  PIL N  F+
Sbjct: 252 LLLMFGVSFVVIVITIFFFTANVQAGELYFMSLLNPILSNVTFV 295


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,868
Number of Sequences: 336
Number of extensions: 2813
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)