Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30036
         (543 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    26   0.19 
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    26   0.19 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   0.75 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   0.75 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    24   0.75 
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   1.7  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   3.0  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   9.2  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   9.2  

>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 26.2 bits (55), Expect = 0.19
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 429 FFLHGLSVLFNDELSGQSYELGG 497
           +FL G   L NDELS  S E+ G
Sbjct: 130 YFLLGFRYLVNDELSAHSKEIRG 152


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 26.2 bits (55), Expect = 0.19
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 429 FFLHGLSVLFNDELSGQSYELGG 497
           +FL G   L NDELS  S E+ G
Sbjct: 444 YFLLGFRYLVNDELSAHSKEIRG 466


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 0.75
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 429 FFLHGLSVLFNDELSGQSYELGG 497
           +FL G  +  NDELS  S E+ G
Sbjct: 677 YFLLGFRLQANDELSAHSKEIRG 699


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 0.75
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 429 FFLHGLSVLFNDELSGQSYELGG 497
           +FL G  +  NDELS  S E+ G
Sbjct: 677 YFLLGFRLQANDELSAHSKEIRG 699


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 0.75
 Identities = 7/24 (29%), Positives = 18/24 (75%)
 Frame = +1

Query: 61  INYSLYNTYIILEKLADRYCFVAA 132
           +N++++N Y++L  L D Y ++++
Sbjct: 115 MNFAIFNLYMVLLLLFDAYLWISS 138


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 109 RLIFQVLCMYCTNCN*LFLIDRVWLSYIL 23
           +L+F VL  Y T C+   ++D  W+  +L
Sbjct: 304 KLLFGVLAYYSTTCDIATILD-FWVRCVL 331


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 503 WNSPEFVTLAAKFIVEED 450
           W +PE V  AAK I+ +D
Sbjct: 461 WTAPEQVQRAAKCIIGKD 478


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -3

Query: 442 PCRKNSGK 419
           PCRKN+G+
Sbjct: 96  PCRKNTGR 103


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 12/47 (25%), Positives = 20/47 (42%)
 Frame = -2

Query: 527 STPTNLVVWNSPEFVTLAAKFIVEEDAEAMQKELREAFRLYDKEGNG 387
           S P    + N P+       F V+   +  +++    FRL D+  NG
Sbjct: 337 SYPEICTLLNDPQNAKTQKAFQVKRVPDPSKRKGSYIFRLPDENNNG 383


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,073
Number of Sequences: 336
Number of extensions: 1728
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)