Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30014X
         (538 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    25   0.42 
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    24   0.74 
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    24   0.74 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   3.9  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   5.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   6.9  

>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 25.0 bits (52), Expect = 0.42
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -2

Query: 123 SKDM*WLKICCSFSFVKLMQSCSKP 49
           SK   W+    SFS VKL  +CS P
Sbjct: 109 SKGSHWMNQDISFSRVKLTNTCSPP 133


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 24.2 bits (50), Expect = 0.74
 Identities = 11/45 (24%), Positives = 18/45 (40%)
 Frame = +2

Query: 257 PKATDQTFVEKLNNNHLGKSAPYLKPKPPKPGCQAAHFAIGHYAG 391
           P  +     + +NN+H+G       P+  +P  Q  H   G   G
Sbjct: 151 PTGSPPLTTQSMNNHHMGHHMQEQHPQHHQPHHQQQHMMYGGQQG 195


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 24.2 bits (50), Expect = 0.74
 Identities = 11/45 (24%), Positives = 18/45 (40%)
 Frame = +2

Query: 257 PKATDQTFVEKLNNNHLGKSAPYLKPKPPKPGCQAAHFAIGHYAG 391
           P  +     + +NN+H+G       P+  +P  Q  H   G   G
Sbjct: 153 PTGSPPLTTQSMNNHHMGHHMQEQHPQHHQPHHQQQHMMYGGQQG 197


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -2

Query: 534 EASPDWPG*SAKISTRSLFWPF 469
           E+ P+W    A   T  LFW F
Sbjct: 238 ESKPNWLFFLANFLTNLLFWEF 259


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 395 VGYNITGWLEKNKDP 439
           V  +I GW+E+  DP
Sbjct: 243 VDASIRGWIERGADP 257


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 176 GMDLQNCIDLIEKPMGILSILEEES 250
           G  L NCI  +   +G+LS   +ES
Sbjct: 197 GAMLTNCICFVPGVLGLLSRSNKES 221


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 176 GMDLQNCIDLIEKPMGILSILEEES 250
           G  L NCI  +   +G+LS   +ES
Sbjct: 197 GAMLTNCICFVPGVLGLLSRSNKES 221


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 176 GMDLQNCIDLIEKPMGILSILEEES 250
           G  L NCI  +   +G+LS   +ES
Sbjct: 197 GAMLTNCICFVPGVLGLLSRSNKES 221


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 176 GMDLQNCIDLIEKPMGILSILEEES 250
           G  L NCI  +   +G+LS   +ES
Sbjct: 197 GAMLTNCICFVPGVLGLLSRSNKES 221


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 171 ILAWTCKIALTLLKSLWVS 227
           I  WT K  ++ L+  W+S
Sbjct: 291 IHVWTSKEKISFLRGFWLS 309



 Score = 21.0 bits (42), Expect = 6.9
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +3

Query: 171 ILAWTCKIALTLLKSLWVS 227
           +  W+  + +++L+SLW S
Sbjct: 548 LYCWSSFLKISVLQSLWAS 566


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,093
Number of Sequences: 336
Number of extensions: 2500
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)