Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30011
         (901 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    29   0.066
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    29   0.066
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    29   0.066
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    29   0.066
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    29   0.066
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    29   0.066
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   2.5  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   2.5  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   4.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   4.3  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   4.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   5.7  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   7.5  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   9.9  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 28.7 bits (61), Expect = 0.066
 Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
 Frame = +3

Query: 90   KLLDPNDTPLSRPVTNEEISWIG-SLLSVGAMFGPFIGGFLASKIGRRWSILLSSVPLIV 266
            + ++ ND  +S P    +I  +G ++L  G +F   +G F+A+     W+    ++  I+
Sbjct: 897  RTIEINDN-ISMPYIGYQILLMGGTILGPGTIFLMLVGAFVAAFQIDNWTSFYYNIIPIL 955

Query: 267  GFVLV--VAVQNVAMIYAGRVFWGLAVGMLYTVL 362
             F+LV      N+ +I A  +  G A+ M+  ++
Sbjct: 956  FFMLVCFTCKSNIQLIVAQILSTGYALIMMAVIV 989


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 28.7 bits (61), Expect = 0.066
 Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
 Frame = +3

Query: 90   KLLDPNDTPLSRPVTNEEISWIG-SLLSVGAMFGPFIGGFLASKIGRRWSILLSSVPLIV 266
            + ++ ND  +S P    +I  +G ++L  G +F   +G F+A+     W+    ++  I+
Sbjct: 897  RTIEINDN-ISMPYIGYQILLMGGTILGPGTIFLMLVGAFVAAFQIDNWTSFYYNIIPIL 955

Query: 267  GFVLV--VAVQNVAMIYAGRVFWGLAVGMLYTVL 362
             F+LV      N+ +I A  +  G A+ M+  ++
Sbjct: 956  FFMLVCFTCKSNIQLIVAQILSTGYALIMMAVIV 989


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 28.7 bits (61), Expect = 0.066
 Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = +3

Query: 144  ISWIGSLLSVGAMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAV--QNVAMIYAG 317
            I  IG+++  G +F   +G F+A+    +WS    ++  I  F+LV A    ++ + +AG
Sbjct: 888  ILMIGTVIGPGTIFLMLVGAFVAAFGLDQWSSFYWNLLPIAVFILVCATCSSDIQLFFAG 947

Query: 318  RV 323
             +
Sbjct: 948  LI 949



 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -2

Query: 375 RSTSAKPYTAYRLPDPRTLC 316
           RST AK Y  Y   + R LC
Sbjct: 798 RSTQAKHYVQYDQGEDRWLC 817


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 28.7 bits (61), Expect = 0.066
 Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = +3

Query: 144  ISWIGSLLSVGAMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAV--QNVAMIYAG 317
            I  IG+++  G +F   +G F+A+    +WS    ++  I  F+LV A    ++ + +AG
Sbjct: 888  ILMIGTVIGPGTIFLMLVGAFVAAFGLDQWSSFYWNLLPIAVFILVCATCSSDIQLFFAG 947

Query: 318  RV 323
             +
Sbjct: 948  LI 949



 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -2

Query: 375 RSTSAKPYTAYRLPDPRTLC 316
           RST AK Y  Y   + R LC
Sbjct: 798 RSTQAKHYVQYDQGEDRWLC 817


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 28.7 bits (61), Expect = 0.066
 Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
 Frame = +3

Query: 90   KLLDPNDTPLSRPVTNEEISWIG-SLLSVGAMFGPFIGGFLASKIGRRWSILLSSVPLIV 266
            + ++ ND  +S P    +I  +G ++L  G +F   +G F+A+     W+    ++  I+
Sbjct: 897  RTIEINDN-ISMPYIGYQILLMGGTILGPGTIFLMLVGAFVAAFQIDNWTSFYYNIIPIL 955

Query: 267  GFVLV--VAVQNVAMIYAGRVFWGLAVGMLYTVL 362
             F+LV      N+ +I A  +  G A+ M+  ++
Sbjct: 956  FFMLVCFTCKSNIQLIVAQILSTGYALIMMAVIV 989


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 28.7 bits (61), Expect = 0.066
 Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
 Frame = +3

Query: 90   KLLDPNDTPLSRPVTNEEISWIG-SLLSVGAMFGPFIGGFLASKIGRRWSILLSSVPLIV 266
            + ++ ND  +S P    +I  +G ++L  G +F   +G F+A+     W+    ++  I+
Sbjct: 897  RTIEINDN-ISMPYIGYQILLMGGTILGPGTIFLMLVGAFVAAFQIDNWTSFYYNIIPIL 955

Query: 267  GFVLV--VAVQNVAMIYAGRVFWGLAVGMLYTVL 362
             F+LV      N+ +I A  +  G A+ M+  ++
Sbjct: 956  FFMLVCFTCKSNIQLIVAQILSTGYALIMMAVIV 989


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = +1

Query: 166 SPSELCSVHSSEVSWLQKSVVDGVFFCHLFHS*SVLFWWWPFKMLQ*FTPAEC 324
           +P+EL  +   +  W +K  + G  +C L +S ++     P + L+ FT  EC
Sbjct: 458 NPTELNGLRDFQ-EWKEKCDIKGQPYCSLPNSCALTTRELPGETLRLFTCMEC 509


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = +1

Query: 166 SPSELCSVHSSEVSWLQKSVVDGVFFCHLFHS*SVLFWWWPFKMLQ*FTPAEC 324
           +P+EL  +   +  W +K  + G  +C L +S ++     P + L+ FT  EC
Sbjct: 465 NPTELNGLRDFQ-EWKEKCDIKGQPYCSLPNSCALTTRELPGETLRLFTCMEC 516


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 611 DLQTFSSRVYVVLVQII 561
           DLQT+  +VY+ LV ++
Sbjct: 197 DLQTWQWKVYITLVALV 213


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +3

Query: 240 LLSSVPLIVGFVLVVAVQNVAMIYAGRVFWGLAVGMLYTVLPMYCA 377
           + + VP+I+  V   A  +  MIY       L + ++Y V    CA
Sbjct: 326 IFTYVPMILYCVYTTATYDSFMIYKTTNIIILGLNVVYVVTAWICA 371


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +3

Query: 240 LLSSVPLIVGFVLVVAVQNVAMIYAGRVFWGLAVGMLYTVLPMYCA 377
           + + VP+I+  V   A  +  MIY       L + ++Y V    CA
Sbjct: 51  IFTYVPMILYCVYTTATYDSFMIYKTTNIIILGLNVVYVVTAWICA 96


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -2

Query: 375 RSTSAKPYTAYRLPDPRTLC 316
           RST AK Y  Y   + R LC
Sbjct: 565 RSTQAKHYVQYDQGEDRWLC 584


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -2

Query: 126 VATRVCR*DLRASSSPAKSIPKQNPEQWCRCSPR 25
           V  ++C     A    A+ IP QNP +    +PR
Sbjct: 282 VLEKICTTTDAAEFLAAQEIPGQNPGEKTNIAPR 315


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -1

Query: 478 GTNGPTPYTSRKPSTTNS*RND 413
           GTN  T    R+ STT   +ND
Sbjct: 113 GTNNGTNKNMRRLSTTTQNKND 134


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,901
Number of Sequences: 336
Number of extensions: 4931
Number of successful extensions: 23
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25030786
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)