Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0028
         (801 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    25   0.93 
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    23   3.7  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    23   3.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   6.5  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   8.7  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   8.7  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   8.7  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   8.7  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 24.6 bits (51), Expect = 0.93
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +3

Query: 624 SSPRLLPTIYPCLYN-TYRIKLEVTSCPSTPT 716
           S+P  LPT      N TY  +  +TSC S PT
Sbjct: 79  STPSSLPTQRTSTSNPTYSSRSVMTSCSSVPT 110


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 6/25 (24%), Positives = 14/25 (56%)
 Frame = +3

Query: 258 SSSARHLWYVSCIRSDRLGPQRTPW 332
           +++  H WY    +  ++GP++  W
Sbjct: 21  ANAPMHSWYAGYHQGAQMGPEQQMW 45


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 6/25 (24%), Positives = 14/25 (56%)
 Frame = +3

Query: 258 SSSARHLWYVSCIRSDRLGPQRTPW 332
           +++  H WY    +  ++GP++  W
Sbjct: 21  ANAPMHSWYAGYHQGAQMGPEQQMW 45


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/20 (35%), Positives = 9/20 (45%)
 Frame = -1

Query: 498 PFSPNVALCFNHISSANQQP 439
           P  PN   C +H+   N  P
Sbjct: 695 PVPPNFPTCGDHVPEINSNP 714


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 605 LKPTTKVKTVLGIHSLQF 552
           LK  TKV T+LG+ S  F
Sbjct: 15  LKCITKVLTILGLLSCSF 32


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -2

Query: 536 AESILNSVLTQNVH 495
           A ++LNSVL QNV+
Sbjct: 257 AYAVLNSVLFQNVY 270


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -2

Query: 536 AESILNSVLTQNVH 495
           A ++LNSVL QNV+
Sbjct: 257 AYAVLNSVLFQNVY 270


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 605 LKPTTKVKTVLGIHSLQF 552
           LK  TKV T+LG+ S  F
Sbjct: 11  LKCITKVLTILGLLSCSF 28


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,076
Number of Sequences: 336
Number of extensions: 3628
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)