Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0024
(718 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein. 23 3.3
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 23 3.3
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 23 3.3
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 22 4.3
AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 22 4.3
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 22 4.3
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 22 5.7
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 22 5.7
AY873916-1|AAW67572.1| 377|Tribolium castaneum chitinase 6 prot... 21 7.6
AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A prot... 21 7.6
AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII pr... 21 7.6
>X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein.
Length = 133
Score = 22.6 bits (46), Expect = 3.3
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -3
Query: 428 RSEQNYTHITVLSLTENFGFNN 363
R Q YT L L + F FN+
Sbjct: 8 RGRQTYTRFQTLELEKEFHFNH 29
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 22.6 bits (46), Expect = 3.3
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -3
Query: 428 RSEQNYTHITVLSLTENFGFNN 363
R Q YT L L + F FN+
Sbjct: 159 RGRQTYTRFQTLELEKEFHFNH 180
Score = 21.4 bits (43), Expect = 7.6
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 494 RPANTTWQMIRELPESPSKSKGDWM 568
+PA Q I ++P P S DWM
Sbjct: 118 QPAAPGGQPIPDIPRYPWMSITDWM 142
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 22.6 bits (46), Expect = 3.3
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -3
Query: 428 RSEQNYTHITVLSLTENFGFNN 363
R Q YT L L + F FN+
Sbjct: 218 RGRQTYTRFQTLELEKEFHFNH 239
Score = 21.4 bits (43), Expect = 7.6
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 494 RPANTTWQMIRELPESPSKSKGDWM 568
+PA Q I ++P P S DWM
Sbjct: 177 QPAAPGGQPIPDIPRYPWMSITDWM 201
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 22.2 bits (45), Expect = 4.3
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 428 RSEQNYTHITVLSLTENFGFN 366
R+ Q YT L L + F FN
Sbjct: 185 RTRQTYTRYQTLELEKEFHFN 205
>AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain
transcription factor Fushitarazu protein.
Length = 290
Score = 22.2 bits (45), Expect = 4.3
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 428 RSEQNYTHITVLSLTENFGFN 366
R+ Q YT L L + F FN
Sbjct: 185 RTRQTYTRYQTLELEKEFHFN 205
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 22.2 bits (45), Expect = 4.3
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 428 RSEQNYTHITVLSLTENFGFN 366
R+ Q YT L L + F FN
Sbjct: 185 RTRQTYTRYQTLELEKEFHFN 205
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 21.8 bits (44), Expect = 5.7
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -3
Query: 428 RSEQNYTHITVLSLTENFGFN 366
R Q YT L L + F FN
Sbjct: 244 RGRQTYTRYQTLELEKEFHFN 264
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 21.8 bits (44), Expect = 5.7
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -3
Query: 428 RSEQNYTHITVLSLTENFGFN 366
R Q YT L L + F FN
Sbjct: 246 RGRQTYTRYQTLELEKEFHFN 266
>AY873916-1|AAW67572.1| 377|Tribolium castaneum chitinase 6
protein.
Length = 377
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +3
Query: 258 DQGLIIILDNGRNVAN 305
D G ++ILDN ++ N
Sbjct: 62 DDGSLLILDNATDITN 77
>AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A
protein.
Length = 150
Score = 21.4 bits (43), Expect = 7.6
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 494 RPANTTWQMIRELPESPSKSKGDWM 568
+PA Q I ++P P S DWM
Sbjct: 118 QPAAPGGQPIPDIPRYPWMSITDWM 142
>AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII
protein.
Length = 209
Score = 21.4 bits (43), Expect = 7.6
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 494 RPANTTWQMIRELPESPSKSKGDWM 568
+PA Q I ++P P S DWM
Sbjct: 177 QPAAPGGQPIPDIPRYPWMSITDWM 201
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,294
Number of Sequences: 336
Number of extensions: 3154
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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